RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TCAF1Q9Y4C2 921 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NUMBLQ9Y6R0 609 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FAM169AQ9Y6X4 670 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ZCWPW2A0A1B0GU75 182 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 HMGB1P1B2RPK0 211 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRKCGP05129 697 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KCNA5P22460 613 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GKP32189 559 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GJA4P35212 333 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MSH2P43246 934 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SMAD1Q15797 465 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NAIF1Q69YI7 327 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CYP4X1Q8N118 509 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PPM1NQ8N819 430 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 LPCAT1Q8NF37 534 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RMDN1Q96DB5 314 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MRGPRX3Q96LB0 322 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FAM159BA6NKW6 160 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 POLR3GO15318 223 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PIGNO95427 931 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ATP5BP06576 529 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PIRTP0C851 137 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 HTR4Q13639 388 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TMED2Q15363 201 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SKIV2LQ15477 1246 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CYS1Q717R9 158 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CAMK1DQ8IU85 385 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RIBC1Q8N443 379 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PCDH20Q8N6Y1 951 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BLOC1S5Q8TDH9 187 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PTCD2Q8WV60 388 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CERS2Q96G23 380 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UBE2ZQ9H832 354 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PPCSQ9HAB8 311 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ELOVL2Q9NXB9 296 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EURLQ9NYK6 297 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PSMC3IPQ9P2W1 217 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FETUBQ9UGM5 382 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 LGALS13Q9UHV8 139 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 HEATR9A2RTY3 570 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TTC34A8MYJ7 566 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GSRP00390 522 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ASLP04424 464 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ERVK-10P10266 1014 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ALADP13716 330 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CA4P22748 312 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NNMTP40261 264 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 OPRD1P41143 372 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MAPK8P45983 427 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BCL2L1Q07817 233 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PTPRNQ16849 979 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CARD16Q5EG05 197 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ESRP1Q6NXG1 681 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ADGRD1Q6QNK2 874 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 Q6ZVU0 165 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 Q7L0L9 218 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 LRRC6Q86X45 466 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DCAKDQ8WVC6 231 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PPM1EQ8WY54 764 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TLCD1Q96CP7 247 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RANBP9Q96S59 729 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DHRS4Q9BTZ2 278 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ADGRE3Q9BY15 652 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MRM3Q9HC36 420 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRKAG3Q9UGI9 489 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC2A6Q9UGQ3 507 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PCDHB9Q9Y5E1 797 aa14.86□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TICRRQ7Z2Z1 1910 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FOXO6A8MYZ6 492 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ANHXE9PGG2 379 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UGT1A9O60656 530 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SRPRAP08240 638 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ITPRIPL2Q3MIP1 535 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TNFAIP8L3Q5GJ75 292 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DPY19L3Q6ZPD9 716 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PHTF2Q8N3S3 785 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC44A1Q8WWI5 657 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MYO19Q96H55 970 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SMIM14Q96QK8 99 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CDX2Q99626 313 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ATP13A3Q9H7F0 1226 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BRD9Q9H8M2 597 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UGT1A7Q9HAW7 530 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UGT1A10Q9HAW8 530 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UGT1A8Q9HAW9 530 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 C20orf96Q9NUD7 363 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC17A6Q9P2U8 582 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 IKBKGQ9Y6K9 419 aa14.85□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ANKRD66B4E2M5 251 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ARNTLO00327 626 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TRAFD1O14545 582 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms