RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 AFMIDQ63HM1 303 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ASRGL1Q7L266 308 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 DNAJB7Q7Z6W7 309 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 CCNJLQ8IV13 435 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 CENPLQ8N0S6 344 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ARHGAP18Q8N392 663 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 OR13J1Q8NGT2 312 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 YME1L1Q96TA2 773 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 NKX1-2Q9UD57 310 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF212Q9UDV6 495 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 DCDC2Q9UHG0 476 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 AGO1Q9UL18 857 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SPO11Q9Y5K1 396 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 RAD54BQ9Y620 910 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 UBA6A0AVT1 1052 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 GSTA1P08263 222 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 KCNA5P22460 613 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 CDC25CP30307 473 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ELF1P32519 619 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ABL2P42684 1182 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 TMEM198Q66K66 360 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 TIFABQ6ZNK6 161 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ANKRD49Q8WVL7 239 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 MRPL9Q9BYD2 267 aaKnown RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ARHGEF3Q9NR81 526 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 TRPM5Q9NZQ8 1165 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 MTRRQ9UBK8 725 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 CLEC4EQ9ULY5 219 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ERI2A8K979 691 aaKnown RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 SBK3P0C264 359 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 CTPS1P17812 591 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 SLC12A2P55011 1212 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 GNA12Q03113 381 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 SLC9B1Q4ZJI4 515 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 KYAT3Q6YP21 454 aaKnown RBP12.68□□□□□ -0.38
LIMK1-201ENST00000336180 LPCAT1Q8NF37 534 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 C1orf74Q96LT6 269 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ABCG8Q9H221 673 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 ENTPD7Q9NQZ7 604 aa12.68□□□□□ -0.38
LIMK1-201ENST00000336180 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 B2RBV5 119 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 TEX28O15482 410 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 TBL1XO60907 577 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 RHOCP08134 193 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 HOXD9P28356 352 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF697Q5TEC3 545 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 NXNQ6DKJ4 435 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 FAM13CQ8NE31 585 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 DTX3LQ8TDB6 740 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SLC22A17Q8WUG5 538 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 HEXDCQ8WVB3 486 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 N4BP2L2Q92802 583 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 NUF2Q9BZD4 464 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 UBE2OQ9C0C9 1292 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 THAP1Q9NVV9 213 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ANKRD12Q6UB98 2062 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 DNAH14Q0VDD8 3507 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 LRRC14BA6NHZ5 514 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 GYG2O15488 501 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SKAP2O75563 359 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 EPHA3P29320 983 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 GRIA4P48058 902 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 CDKN2DP55273 166 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ABCE1P61221 599 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 LRRC73Q5JTD7 316 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 GBP7Q8N8V2 638 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 HIPK4Q8NE63 616 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 CADM1Q9BY67 442 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 HCFC1R1Q9NWW0 138 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 H0Y626 953 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 C1RP00736 705 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SERPINE1P05121 402 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ATXN1LP0C7T5 689 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 STMN1P16949 149 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 CNTFP26441 200 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 CD151P48509 253 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SLC11A2P49281 568 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ATXN3P54252 364 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms