RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 RFWD2Q8NHY2 731 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 BHMTQ93088 406 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 ALG14Q96F25 216 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 FEM1AQ9BSK4 669 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 SLC46A2Q9BY10 475 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZNF548-201ENST00000336128 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 CHKBQ9Y259 395 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 CCL22O00626 93 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 SLC7A4O43246 635 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 UBOX5O94941 541 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 SAT1P21673 171 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 CES1P23141 567 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 CCR2P41597 374 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 POLD2P49005 469 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 LIG3P49916 1009 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ARSDP51689 593 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 LAMB3Q13751 1172 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 PCLAFQ15004 111 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 KIAA0408Q6ZU52 694 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MFN1Q8IWA4 741 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ZNF398Q8TD17 642 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 C7orf26Q96N11 449 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 TRIM55Q9BYV6 548 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MCOLN1Q9GZU1 580 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 SMG9Q9H0W8 520 aaKnown RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MFSD1Q9H3U5 465 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MAN1C1Q9NR34 630 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 FBXO6Q9NRD1 293 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 RWDD3Q9Y3V2 267 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ARL5AQ9Y689 179 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 PHGDHO43175 533 aaKnown RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 TGDSO95455 350 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 PIRTP0C851 137 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 FGF3P11487 239 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 AVPR1AP37288 418 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 PRAMEP78395 509 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ACVR1Q04771 509 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 STX3Q13277 289 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 GPR158Q5T848 1215 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MBLAC2Q68D91 279 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 RAPH1Q70E73 1250 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 PPP1R14CQ8TAE6 165 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 GABPB2Q8TAK5 448 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 MICAL1Q8TDZ2 1067 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 HDAC10Q969S8 669 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 DNAJC1Q96KC8 554 aaKnown RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 TLK1Q9UKI8 766 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
ZNF548-201ENST00000336128 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
ZNF548-201ENST00000336128 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 AURKAO14965 403 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 RFPL2O75678 378 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 HAUS5O94927 633 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 ARHGEF15O94989 841 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 FSBPO95073 299 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 KCNA4P22459 653 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 IRS1P35568 1242 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 SCTRP47872 440 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 EPHA5P54756 1037 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 OCRLQ01968 901 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 UBE3AQ05086 875 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 NSUN2Q08J23 767 aaKnown RBP eCLIP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 CCDC15Q0P6D6 951 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 FITM2Q8N6M3 262 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 GPATCH11Q8N954 259 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 BRSK1Q8TDC3 778 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 TCEAL4Q96EI5 215 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 ZNF395Q9H8N7 513 aaPredicted RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 COPG2Q9UBF2 871 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 DCTN4Q9UJW0 460 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.4
ZNF548-201ENST00000336128 SPO11Q9Y5K1 396 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.4
ZNF548-201ENST00000336128 OR51F1A6NGY5 319 aa12.52□□□□□ -0.41
ZNF548-201ENST00000336128 GRM6O15303 877 aa12.52□□□□□ -0.41
ZNF548-201ENST00000336128 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
ZNF548-201ENST00000336128 SNNO75324 88 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-201ENST00000336128 MOSPD3O75425 235 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms