RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CPSF7Q8N684 471 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 KDM1BQ8NB78 822 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 SGF29Q96ES7 293 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 B3GALT6Q96L58 329 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 GLT1D1Q96MS3 346 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 ZNF184Q99676 751 aaPredicted RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 CCDC28BQ9BUN5 200 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 OLA1Q9NTK5 396 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 MARCH2Q9P0N8 246 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 CDYLQ9Y232 598 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 BRCA2P51587 3418 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 MROH6A6NGR9 719 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 OR6C75A6NL08 312 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 BAG2O95816 211 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 THRAP10827 490 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 ATP5F1P24539 256 aaPredicted RBP14.67□□□□□ -0.06
TPM3-206ENST00000330188 SIRPB2Q5JXA9 342 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 PPM1LQ5SGD2 360 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 C10orf120Q5SQS8 335 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 PIWIL4Q7Z3Z4 852 aaKnown RBP14.67□□□□□ -0.06
TPM3-206ENST00000330188 GALNT7Q86SF2 657 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 ADGRG6Q86SQ4 1221 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 HPS6Q86YV9 775 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 FBXW8Q8N3Y1 598 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 CCDC124Q96CT7 223 aaKnown RBP14.67□□□□□ -0.06
TPM3-206ENST00000330188 GPR62Q9BZJ7 368 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.67□□□□□ -0.06
TPM3-206ENST00000330188 CRISPLD1Q9H336 500 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 TLR8Q9NR97 1041 aaKnown RBP14.67□□□□□ -0.06
TPM3-206ENST00000330188 TMEM161AQ9NX61 479 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
TPM3-206ENST00000330188 POMPQ9Y244 141 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 SLC27A5Q9Y2P5 690 aa14.67□□□□□ -0.06
TPM3-206ENST00000330188 SLC12A8A0AV02 714 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 RGSL1A5PLK6 1076 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 NEMP2A6NFY4 417 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 A6NHS1 94 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 SLC22A2O15244 555 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 RAMP2O60895 175 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 RTN3O95197 1032 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 ATXN1LP0C7T5 689 aaKnown RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 PPARGP37231 505 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 ARSDP51689 593 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MTTPP55157 894 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 ARPP19P56211 112 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 PFKPQ01813 784 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 KLC1Q07866 573 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 IL10RBQ08334 325 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 POLD3Q15054 466 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 SLC14A2Q15849 920 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 PDCD2Q16342 344 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 FAM83EQ2M2I3 478 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 TMEM198Q66K66 360 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 IRGCQ6NXR0 463 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 TRIM67Q6ZTA4 783 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 PTAR1Q7Z6K3 402 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 SNX32Q86XE0 403 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 CILP2Q8IUL8 1156 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 PNPLA1Q8N8W4 532 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 GABPB2Q8TAK5 448 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 PYDC1Q8WXC3 89 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 JADE3Q92613 823 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 RPRD1AQ96P16 312 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 CATSPER2Q96P56 530 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MFSD1Q9H3U5 465 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 NCKIPSDQ9NZQ3 722 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 ABT1Q9ULW3 272 aaKnown RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 G3BP2Q9UN86 482 aaKnown RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 LOC285095A0A1B0GVY8 99 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MTMR11A4FU01 709 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 TMEM233B4DJY2 109 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 CCL22O00626 93 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 SLC7A4O43246 635 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 BUD23O43709 281 aaKnown RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 VNN2O95498 520 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 FGFR3P22607 806 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 ACVRL1P37023 503 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 ETFBP38117 255 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 MRPS35P82673 323 aaKnown RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 SERINC3Q13530 473 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 TCHHL1Q5QJ38 904 aaPredicted RBP14.66□□□□□ -0.06
TPM3-206ENST00000330188 HECTD2Q5U5R9 776 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 AGAP9Q5VTM2 703 aa14.66□□□□□ -0.06
TPM3-206ENST00000330188 SNUPNO95149 360 aaKnown RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 ALDH1A1P00352 501 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 LTA4HP09960 611 aaKnown RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 KCNA5P22460 613 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 ADSLP30566 484 aaPredicted RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 LBRQ14739 615 aaKnown RBP14.65□□□□□ -0.06
TPM3-206ENST00000330188 MGAT5BQ3V5L5 792 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 PARP15Q460N3 678 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 SH2D4BQ5SQS7 431 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 NXNQ6DKJ4 435 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 NADSYN1Q6IA69 706 aa14.65□□□□□ -0.06
TPM3-206ENST00000330188 RSPO2Q6UXX9 243 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms