RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.05■□□□□ -02e-8■■□□□ 11.4
TPM3-205ENST00000328159 VPS28Q9UK41 221 aa15.05■□□□□ -0
TPM3-205ENST00000328159 TLK1Q9UKI8 766 aa15.05■□□□□ -0
TPM3-205ENST00000328159 KCTD3Q9Y597 815 aa15.05■□□□□ -0
TPM3-205ENST00000328159 OR51B4Q9Y5P0 310 aa15.05■□□□□ -0
TPM3-205ENST00000328159 ANKRD36A6QL64 1941 aa15.04■□□□□ -0
TPM3-205ENST00000328159 DOCK6Q96HP0 2047 aa15.04■□□□□ -0
TPM3-205ENST00000328159 FAM95CA0A1B0GW59 222 aa15.04■□□□□ -0
TPM3-205ENST00000328159 TMCC1O94876 653 aa15.04■□□□□ -0
TPM3-205ENST00000328159 UBOX5O94941 541 aa15.04■□□□□ -0
TPM3-205ENST00000328159 SAT1P21673 171 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CSKP41240 450 aa15.04■□□□□ -0
TPM3-205ENST00000328159 SCTRP47872 440 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CLCN4P51793 760 aa15.04■□□□□ -0
TPM3-205ENST00000328159 OCRLQ01968 901 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CCDC15Q0P6D6 951 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CDH18Q13634 790 aa15.04■□□□□ -0
TPM3-205ENST00000328159 PCLAFQ15004 111 aa15.04■□□□□ -0
TPM3-205ENST00000328159 GALNTL6Q49A17 601 aa15.04■□□□□ -0
TPM3-205ENST00000328159 LINGO4Q6UY18 593 aa15.04■□□□□ -0
TPM3-205ENST00000328159 RAPH1Q70E73 1250 aa15.04■□□□□ -0
TPM3-205ENST00000328159 RNF135Q8IUD6 432 aa15.04■□□□□ -0
TPM3-205ENST00000328159 BBS7Q8IWZ6 715 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CPXM2Q8N436 756 aa15.04■□□□□ -0
TPM3-205ENST00000328159 FITM2Q8N6M3 262 aa15.04■□□□□ -0
TPM3-205ENST00000328159 GBP7Q8N8V2 638 aaPredicted RBP15.04■□□□□ -0
TPM3-205ENST00000328159 TDRD5Q8NAT2 981 aaKnown RBP15.04■□□□□ -0
TPM3-205ENST00000328159 WFDC5Q8TCV5 224 aa15.04■□□□□ -0
TPM3-205ENST00000328159 HDAC10Q969S8 669 aa15.04■□□□□ -0
TPM3-205ENST00000328159 SLC46A2Q9BY10 475 aa15.04■□□□□ -0
TPM3-205ENST00000328159 MFSD1Q9H3U5 465 aa15.04■□□□□ -0
TPM3-205ENST00000328159 TLR9Q9NR96 1032 aa15.04■□□□□ -0
TPM3-205ENST00000328159 CHKBQ9Y259 395 aa15.04■□□□□ -0
TPM3-205ENST00000328159 LEFTY2O00292 366 aa15.03■□□□□ -0
TPM3-205ENST00000328159 PHGDHO43175 533 aaKnown RBP15.03■□□□□ -0
TPM3-205ENST00000328159 SNNO75324 88 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 DCTN3O75935 186 aa15.03■□□□□ -0
TPM3-205ENST00000328159 HAUS5O94927 633 aa15.03■□□□□ -0
TPM3-205ENST00000328159 FGF3P11487 239 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 KCNA4P22459 653 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ARSDP51689 593 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ACVR1Q04771 509 aa15.03■□□□□ -0
TPM3-205ENST00000328159 STX3Q13277 289 aa15.03■□□□□ -0
TPM3-205ENST00000328159 TAF1BQ53T94 588 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 INO80DQ53TQ3 878 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 MFN1Q8IWA4 741 aa15.03■□□□□ -0
TPM3-205ENST00000328159 MFSD6LQ8IWD5 586 aa15.03■□□□□ -0
TPM3-205ENST00000328159 OR6P1Q8NGX9 317 aa15.03■□□□□ -0
TPM3-205ENST00000328159 PPP1R14CQ8TAE6 165 aa15.03■□□□□ -0
TPM3-205ENST00000328159 BRSK1Q8TDC3 778 aa15.03■□□□□ -0
TPM3-205ENST00000328159 DDI1Q8WTU0 396 aa15.03■□□□□ -0
TPM3-205ENST00000328159 PEX13Q92968 403 aa15.03■□□□□ -0
TPM3-205ENST00000328159 BHMTQ93088 406 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ALG14Q96F25 216 aa15.03■□□□□ -0
TPM3-205ENST00000328159 TDRD1Q9BXT4 1180 aaKnown RBP15.03■□□□□ -0
TPM3-205ENST00000328159 FBXO6Q9NRD1 293 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 HCFC1R1Q9NWW0 138 aa15.03■□□□□ -0
TPM3-205ENST00000328159 COPG2Q9UBF2 871 aa15.03■□□□□ -0
TPM3-205ENST00000328159 LHX3Q9UBR4 397 aa15.03■□□□□ -0
TPM3-205ENST00000328159 DCTN4Q9UJW0 460 aa15.03■□□□□ -0
TPM3-205ENST00000328159 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
TPM3-205ENST00000328159 RWDD3Q9Y3V2 267 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ARIH1Q9Y4X5 557 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 LINC01553A4QN01 128 aa15.03■□□□□ -0
TPM3-205ENST00000328159 CCL22O00626 93 aa15.03■□□□□ -0
TPM3-205ENST00000328159 CPA3P15088 417 aa15.03■□□□□ -0
TPM3-205ENST00000328159 AVPR1AP37288 418 aa15.03■□□□□ -0
TPM3-205ENST00000328159 CCR2P41597 374 aa15.03■□□□□ -0
TPM3-205ENST00000328159 MAGEA9P43362 315 aa15.03■□□□□ -0
TPM3-205ENST00000328159 LEPRP48357 1165 aaKnown RBP15.03■□□□□ -0
TPM3-205ENST00000328159 PRAMEP78395 509 aa15.03■□□□□ -0
TPM3-205ENST00000328159 NSUN2Q08J23 767 aaKnown RBP eCLIP15.03■□□□□ -0
TPM3-205ENST00000328159 SLC12A1Q13621 1099 aa15.03■□□□□ -0
TPM3-205ENST00000328159 SETDB1Q15047 1291 aa15.03■□□□□ -0
TPM3-205ENST00000328159 MPPE1Q53F39 396 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
TPM3-205ENST00000328159 PTAR1Q7Z6K3 402 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 LCA5Q86VQ0 697 aa15.03■□□□□ -0
TPM3-205ENST00000328159 C10orf107Q8IVU9 208 aa15.03■□□□□ -0
TPM3-205ENST00000328159 LMNTD2Q8IXW0 634 aa15.03■□□□□ -0
TPM3-205ENST00000328159 C10orf67Q8IYJ2 551 aa15.03■□□□□ -0
TPM3-205ENST00000328159 DCAF4L2Q8NA75 395 aa15.03■□□□□ -0
TPM3-205ENST00000328159 SHKBP1Q8TBC3 707 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ELMO2Q96JJ3 720 aa15.03■□□□□ -0
TPM3-205ENST00000328159 TSNARE1Q96NA8 513 aa15.03■□□□□ -0
TPM3-205ENST00000328159 C17orf80Q9BSJ5 609 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ZNF395Q9H8N7 513 aaPredicted RBP15.03■□□□□ -0
TPM3-205ENST00000328159 DNMT3BQ9UBC3 853 aaKnown RBP15.03■□□□□ -0
TPM3-205ENST00000328159 VPS51Q9UID3 782 aa15.03■□□□□ -0
TPM3-205ENST00000328159 RIMKLBQ9ULI2 386 aa15.03■□□□□ -0
TPM3-205ENST00000328159 ARL5AQ9Y689 179 aa15.03■□□□□ -0
TPM3-205ENST00000328159 HGSO14964 777 aaPredicted RBP15.02□□□□□ -0.01
TPM3-205ENST00000328159 AURKAO14965 403 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 RPP40O75818 363 aaKnown RBP15.02□□□□□ -0.01
TPM3-205ENST00000328159 FGF19O95750 216 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 PIRTP0C851 137 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 SLC35E2BP0CK96 405 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 COL6A2P12110 1019 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 STMN1P16949 149 aa15.02□□□□□ -0.01
TPM3-205ENST00000328159 SYN1P17600 705 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms