RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RBM4Q9BWF3 364 aaKnown RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 PCGF6Q9BYE7 350 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 WDR12Q9GZL7 423 aaKnown RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 NOX4Q9NPH5 578 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 G6PC2Q9NQR9 355 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 ANKRD10Q9NXR5 420 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 HDAC6Q9UBN7 1215 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 SIX4Q9UIU6 781 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 SMAD5-AS1Q9Y6J3 95 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 CGNL1Q0VF96 1302 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 H0Y3Z8 333 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 C16orf97H3BN30 126 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 ACKR2O00590 384 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 EXTL3O43909 919 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF500O60304 480 aaPredicted RBP3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SERPINC1P01008 464 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 CSF1P09603 554 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 TTKP33981 857 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 LIFRP42702 1097 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 PTPN9P43378 593 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 CHAF1AQ13111 956 aaPredicted RBP3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 TNFAIP1Q13829 316 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 PUM3Q15397 648 aaKnown RBP3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 ME3Q16798 604 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SULT6B1Q6IMI4 303 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 XRRA1Q6P2D8 792 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 RRAGAQ7L523 313 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SYT13Q7L8C5 426 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SLC9B2Q86UD5 537 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 MON1AQ86VX9 555 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SFR1Q86XK3 245 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SFTPA2Q8IWL1 248 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 ARRDC2Q8TBH0 407 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 TMEM170AQ8WVE7 144 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 TANKQ92844 425 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SLC9A2Q9UBY0 812 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 SLCO3A1Q9UIG8 710 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 KCNS2Q9ULS6 477 aa3.04□□□□□ -1.92
CBX3P1-201ENST00000325243 A0A0G2JPF8 293 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 HNRNPCL3B7ZW38 293 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 E7EVH7 732 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 HSPA12AO43301 675 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 HBP1O60381 514 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 HNRNPCL1O60812 293 aaKnown RBP3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 HNRNPCL4P0DMR1 293 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 TNNT1P13805 278 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 TNFAIP2Q03169 654 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 FOXO1Q12778 655 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 OASLQ15646 514 aaKnown RBP3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 SYT16Q17RD7 645 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 DSG4Q86SJ6 1040 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 ATG16L2Q8NAA4 619 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 OR6Y1Q8NGX8 325 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 TTC14Q96N46 770 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 YME1L1Q96TA2 773 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 RMDN3Q96TC7 470 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 SPATS2LQ9NUQ6 558 aaKnown RBP3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 DACT1Q9NYF0 836 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 VDAC3Q9Y277 283 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 LRCH1Q9Y2L9 728 aa3.03□□□□□ -1.92
CBX3P1-201ENST00000325243 EBAG9O00559 213 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 MID1O15344 667 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 MCM3P25205 808 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 CST5P28325 142 aaPredicted RBP3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 ALDH4A1P30038 563 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 NOVP48745 357 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 RBM5P52756 815 aaKnown RBP eCLIP3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 ARSFP54793 590 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 PMP22Q01453 160 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 ICA1Q05084 483 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 ARHGAP11AQ6P4F7 1023 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 ZNF497Q6ZNH5 498 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 FAM76AQ8TAV0 307 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 CREB3L4Q8TEY5 395 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 MASTLQ96GX5 879 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 TMEM19Q96HH6 336 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 CCDC136Q96JN2 1154 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 LITAFQ99732 161 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 NPLQ9BXD5 320 aaPredicted RBP3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 CD207Q9UJ71 328 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 PSAT1Q9Y617 370 aa3.02□□□□□ -1.93
CBX3P1-201ENST00000325243 SLC25A17O43808 307 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 ADAP00813 363 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 RNF224P0DH78 156 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 SETSIPP0DME0 302 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 PIGAP37287 484 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 ZNF484Q5JVG2 852 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 PAPPA-AS1Q5QFB9 102 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 SH2D4BQ5SQS7 431 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 CCSAPQ6IQ19 270 aaPredicted RBP3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 FAM122CQ6P4D5 195 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 SHFQ7M4L6 423 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 ZC3HC1Q86WB0 502 aaKnown RBP3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 MAPK1IP1LQ8NDC0 245 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 GRAPLQ8TC17 118 aaPredicted RBP3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 OTULINQ96BN8 352 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 SDCCAG3Q96C92 435 aa3.01□□□□□ -1.93
CBX3P1-201ENST00000325243 BARHL1Q9BZE3 327 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms