RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	GBA3	Q9H227	469 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	CAAP1	Q9H8G2	361 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	COPG2	Q9UBF2	871 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	PCDHGB4	Q9UN71	923 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	KCTD3	Q9Y597	815 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	ORC6	Q9Y5N6	252 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	EP400	Q96L91	3159 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	PLIN3	O60664	434 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	AMH	P03971	560 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	CHRNG	P07510	517 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	CLEC6A	Q6EIG7	209 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	MAMDC4	Q6UXC1	1216 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	RNF168	Q8IYW5	571 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF778	Q96MU6	729 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	PHACTR1	Q9C0D0	580 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	USP29	Q9HBJ7	922 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	GDAP2	Q9NXN4	497 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	FCF1	Q9Y324	198 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	TIMM22	Q9Y584	194 aa		11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-223	ENST00000324771	SAC3D1	A6NKF1	404 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	OR6C75	A6NL08	312 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	IQCF5	A8MTL0	148 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	HLA-DQB2	P05538	268 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CDH5	P33151	784 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	GABRB2	P47870	512 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TTLL9	Q3SXZ7	439 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	SWT1	Q5T5J6	900 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ELMSAN1	Q6PJG2	1045 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	DOK6	Q6PKX4	331 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CDHR3	Q6ZTQ4	885 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ITIH5	Q86UX2	942 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CAND1	Q86VP6	1230 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF781	Q8N8C0	355 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	FAM13C	Q8NE31	585 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	OR13C4	Q8NGS5	318 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ABTB1	Q969K4	478 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	RCN3	Q96D15	328 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	MED8	Q96G25	268 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	MAF1	Q9H063	256 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	MTIF3	Q9H2K0	278 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ADNP	Q9H2P0	1102 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	RIC8B	Q9NVN3	520 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CFAP97	Q9P2B7	532 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	DTNA	Q9Y4J8	743 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TEX264	Q9Y6I9	313 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	XIRP1	Q702N8	1843 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	MRAS	O14807	208 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CD3EAP	O15446	510 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CTNNB1	P35222	781 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	GTF2H3	Q13889	308 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	KCNJ11	Q14654	390 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TBCC	Q15814	346 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CST9	Q5W186	159 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	SLC30A9	Q6PML9	568 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	RBM15B	Q8NDT2	890 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	C3orf58	Q8NDZ4	430 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CCDC126	Q96EE4	140 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	VPS50	Q96JG6	964 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	FOPNL	Q96NB1	174 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TRIM15	Q9C019	465 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TMLHE	Q9NVH6	421 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CDK5RAP2	Q96SN8	1893 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	HDAC3	O15379	428 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ITM2A	O43736	263 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	TMEM198	Q66K66	360 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	POTEH	Q6S545	545 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	GPSM1	Q86YR5	675 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ING5	Q8WYH8	240 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	SPATA16	Q9BXB7	569 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	GPR62	Q9BZJ7	368 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	ZFP14	Q9HCL3	533 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	HCST	Q9UBK5	93 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	SLC25A13	Q9UJS0	675 aa		11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	HBS1L	Q9Y450	684 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-223	ENST00000324771	CCL16	O15467	120 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	LINC00032	P0C843	101 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	ATP5F1	P24539	256 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	MC4R	P32245	332 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	CDK7	P50613	346 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	CYP4F8	P98187	520 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	AARS2	Q5JTZ9	985 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	TXNDC8	Q6A555	127 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	LRRTM3	Q86VH5	581 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	SIGLEC10	Q96LC7	697 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	MYOC	Q99972	504 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	TBCD	Q9BTW9	1192 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	BBS2	Q9BXC9	721 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	NMUR1	Q9HB89	426 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	AXIN1	O15169	862 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	INPP4B	O15327	924 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	MYO1D	O94832	1006 aa		11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	STAU1	O95793	577 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF7	P17097	686 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-223	ENST00000324771	CACNA2D1	P54289	1103 aa		11.9	□□□□□ -0.5

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