RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ABRAXAS1Q6UWZ7 409 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 ERO1BQ86YB8 467 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 FAM45AQ8TCE6 357 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 TNFRSF12AQ9NP84 129 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 OAZ3Q9UMX2 235 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 FAM95CA0A1B0GW59 222 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 ATP6AP2A0A1C7CYW4 349 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 ATP6AP2O75787 350 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 CD68P34810 354 aaPredicted RBP18.02■□□□□ 0.47
PRKCB-202ENST00000321728 YAP1P46937 504 aaKnown RBP18.02■□□□□ 0.47
PRKCB-202ENST00000321728 INPP5AQ14642 412 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 KCTD11Q693B1 232 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 DCLRE1AQ6PJP8 1040 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 RNF135Q8IUD6 432 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 PPP1R13LQ8WUF5 828 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 PPP1R10Q96QC0 940 aaKnown RBP18.02■□□□□ 0.47
PRKCB-202ENST00000321728 NEURL2Q9BR09 285 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 C9orf16Q9BUW7 83 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 FADS3Q9Y5Q0 445 aa18.02■□□□□ 0.47
PRKCB-202ENST00000321728 SCN1AP35498 2009 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 A0A087WZ62 844 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CYP2C9P11712 490 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 PSMA4P25789 261 aaKnown RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 YWHAQP27348 245 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 PLK1P53350 603 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 BCAT1P54687 386 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 FAM219BQ5XKK7 198 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 EGFLAMQ63HQ2 1017 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ZNF354CQ86Y25 554 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 HEXDCQ8WVB3 486 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 SEPT8Q92599 483 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 TANKQ92844 425 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ELMO2Q96JJ3 720 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 FAR2Q96K12 515 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 GPR20Q99678 358 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 MRPL57Q9BQC6 102 aaKnown RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 FDXACB1Q9BRP7 624 aaPredicted RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CCDC68Q9H2F9 335 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ERI2A8K979 691 aaKnown RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 BAIAP3O94812 1187 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ERCC2P18074 760 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ARF4P18085 180 aaPredicted RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ATP5F1P24539 256 aaPredicted RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 GNA12Q03113 381 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 RGS21Q2M5E4 152 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 GJC2Q5T442 439 aaPredicted RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CATSPERGQ6ZRH7 1159 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CUZD1Q86UP6 607 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 ZC3H7AQ8IWR0 971 aaKnown RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 SLC15A4Q8N697 577 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CHPT1Q8WUD6 406 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 LRCH3Q96II8 777 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 MTG1Q9BT17 334 aaPredicted RBP18.01■□□□□ 0.47
PRKCB-202ENST00000321728 YIPF2Q9BWQ6 316 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 TRIM15Q9C019 465 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 GBA3Q9H227 469 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 MEAF6Q9HAF1 191 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 CHST12Q9NRB3 414 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 AGPAT4Q9NRZ5 378 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 GID8Q9NWU2 228 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 HACD3Q9P035 362 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 TRIM17Q9Y577 477 aa18.01■□□□□ 0.47
PRKCB-202ENST00000321728 TMEM247A6NEH6 219 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 SOWAHBA6NEL2 793 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 CFAP99D6REC4 459 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 M0QYT0 321 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 ESRRBO95718 433 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 STAU1O95793 577 aaKnown RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 ITGADQ13349 1161 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 UGP2Q16851 508 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 NIPAL1Q6NVV3 410 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 PDZD4Q76G19 769 aaPredicted RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 SPNS2Q8IVW8 549 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 MFSD6LQ8IWD5 586 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 HNRNPABQ99729 332 aaKnown RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 FAM124BQ9H5Z6 455 aaPredicted RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 EML4Q9HC35 981 aaKnown RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 GNPTGQ9UJJ9 305 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 MTF2Q9Y483 593 aaPredicted RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 CORINQ9Y5Q5 1042 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 TANC1Q9C0D5 1861 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 C1orf232A0A0U1RR37 186 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 TRIM64A6NGJ6 449 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 SOBPA7XYQ1 873 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 FAM72CH0Y354 149 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 EI24O14681 340 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 DCLK1O15075 740 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 SNAP91O60641 907 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 TMED10P49755 219 aaKnown RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 CDH17Q12864 832 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 NFATC3Q12968 1075 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 PLCL1Q15111 1095 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 FAM72AQ5TYM5 149 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 FAM72DQ6L9T8 149 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 FAM72BQ86X60 149 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 PCYOX1LQ8NBM8 494 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 ACDQ96AP0 544 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 ADAMTS10Q9H324 1103 aa18■□□□□ 0.47
PRKCB-202ENST00000321728 SOX17Q9H6I2 414 aaPredicted RBP18■□□□□ 0.47
PRKCB-202ENST00000321728 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms