RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 TPH1P17752 444 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 GALNT3Q14435 633 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 C9orf64Q5T6V5 341 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 GDPD4Q6W3E5 623 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 ANKMY2Q8IV38 441 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 LPCAT1Q8NF37 534 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 SHDQ96IW2 340 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 TRIB3Q96RU7 358 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 OSBPL1AQ9BXW6 950 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 IL22Q9GZX6 179 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 WNT16Q9UBV4 365 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 HCN2Q9UL51 889 aa27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 NDRG2Q9UN36 371 aaKnown RBP27.66■■■□□ 2.02
CTDNEP1-201ENST00000318988 A0A1W2PQ67 120 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 SYNCRIPO60506 623 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 SIN3BO75182 1162 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 BANF1O75531 89 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 PGLSO95336 258 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 UGT2B4P06133 528 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 NTSR1P30989 418 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 WASP42768 502 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 RPL26P61254 145 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 MRPS21P82921 87 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 ELAVL3Q14576 367 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 CCDC38Q502W7 563 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 ARSIQ5FYB1 569 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 BEND6Q5SZJ8 279 aaPredicted RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 DENND5AQ6IQ26 1287 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 TRMT10CQ7L0Y3 403 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 DSG4Q86SJ6 1040 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 RELL1Q8IUW5 271 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 UBALD2Q8IYN6 164 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 STK40Q8N2I9 435 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 ANKRD7Q92527 254 aa27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 RPL26L1Q9UNX3 145 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 MRPS17Q9Y2R5 130 aaKnown RBP27.65■■■□□ 2.02
CTDNEP1-201ENST00000318988 HTRA2O43464 458 aaPredicted RBP27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 PRNPP04156 253 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 ATXN1LP0C7T5 689 aaKnown RBP27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 ALADP13716 330 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 CD72P21854 359 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 ELK3P41970 407 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 CBLBQ13191 982 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 DENND2CQ68D51 928 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 PALM2Q8IXS6 379 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 NDUFAF2Q8N183 169 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 FBXO36Q8NEA4 188 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 UBLCP1Q8WVY7 318 aaPredicted RBP27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 STAMBPL1Q96FJ0 436 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 TTC25Q96NG3 672 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 CHMP2BQ9UQN3 213 aa27.64■■■□□ 2.02
CTDNEP1-201ENST00000318988 LEFTY1O75610 366 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 PDHA1P08559 390 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 ENPP2Q13822 863 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 STARD3Q14849 445 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 CERCAMQ5T4B2 595 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 SIGLEC10Q96LC7 697 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 C9orf72Q96LT7 481 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 NAT9Q9BTE0 207 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 CDC42EP4Q9H3Q1 356 aaKnown RBP27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 SYBUQ9NX95 663 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 WASF2Q9Y6W5 498 aa27.63■■■□□ 2.01
CTDNEP1-201ENST00000318988 MAGEB16A2A368 324 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 ANTXRLA6NF34 631 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 TRAFD1O14545 582 aaPredicted RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 KLF8O95600 359 aaPredicted RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 GRIA4P48058 902 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 CRADDP78560 199 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 FASTKD3Q14CZ7 662 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 CCNJLQ8IV13 435 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 PPHLN1Q8NEY8 458 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 KLHL32Q96NJ5 620 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 EBNA1BP2Q99848 306 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 TXLNGYQ9BZA5 131 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 PRSS16Q9NQE7 514 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 TEX264Q9Y6I9 313 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 ANKRD66B4E2M5 251 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 FZD6O60353 706 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 PRLP01236 227 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 POLR2LP62875 67 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 POU6F1Q14863 301 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 MPP5Q8N3R9 675 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 MREGQ8N565 214 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 SEMA4AQ9H3S1 761 aa27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 ZC3H7BQ9UGR2 993 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-201ENST00000318988 RNASEH1O60930 286 aaKnown RBP27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 RNF40O75150 1001 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 LAMB3Q13751 1172 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 SEPT6Q14141 434 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 KYNUQ16719 465 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 HSF5Q4G112 596 aaPredicted RBP27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 PCID2Q5JVF3 399 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 BRAT1Q6PJG6 821 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 GJD3Q8N144 294 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 IL17RCQ8NAC3 791 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 TMIEQ8NEW7 156 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 CFAP36Q96G28 342 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 NINJ2Q9NZG7 142 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 PHTF1Q9UMS5 762 aa27.61■■■□□ 2.01
CTDNEP1-201ENST00000318988 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms