RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MGAT1P26572 445 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 PRKCQQ04759 706 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 RAD51Q06609 339 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 PDIA2Q13087 525 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 ELAVL3Q14576 367 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 SLC1A5Q15758 541 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 TMEM92Q6UXU6 159 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 GDPD4Q6W3E5 623 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 UBALD2Q8IYN6 164 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 ZBED8Q8IZ13 594 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 AGGF1Q8N302 714 aaeCLIP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 BBOF1Q8ND07 529 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 OR8D1Q8WZ84 308 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 MKRN2Q9H000 416 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 FNDC3AQ9Y2H6 1198 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 MAD1L1Q9Y6D9 718 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 BHMG1C9JSJ3 638 aaPredicted RBP15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 TRAFD1O14545 582 aaPredicted RBP15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 TPSB2P20231 275 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 ADRA1AP35348 466 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 TUBB4BP68371 445 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 DHX9Q08211 1270 aaKnown RBP15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 SEPT6Q14141 434 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 TPSAB1Q15661 275 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 ARMC12Q5T9G4 340 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 NAPEPLDQ6IQ20 393 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 CES3Q6UWW8 571 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 CCNI2Q6ZMN8 369 aaPredicted RBP15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 PIP4K2CQ8TBX8 421 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 SUV39H2Q9H5I1 410 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 SAYSD1Q9NPB0 183 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 CD93Q9NPY3 652 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 VPS45Q9NRW7 570 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 CHMP2BQ9UQN3 213 aa15.52■□□□□ 0.07
PDLIM5-202ENST00000318007 A0A1W2PQF6 199 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 PRLP01236 227 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 ABL2P42684 1182 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 DRG2P55039 364 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 GAS6Q14393 721 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 STARD3Q14849 445 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 TMEM31Q5JXX7 168 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 HOOK3Q86VS8 718 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 SHDQ96IW2 340 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 C9orf72Q96LT7 481 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 SYBUQ9NX95 663 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 IL1RAPL1Q9NZN1 696 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 MTRF1LQ9UGC7 380 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 ITM2BQ9Y287 266 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 MYLKQ15746 1914 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 TTC28Q96AY4 2481 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 TCRBV21S2A2A0A5A6 115 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 AURKAO14965 403 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 MID1O15344 667 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 STARD6P59095 220 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 SARNPP82979 210 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 ZXDAP98168 799 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 CDH17Q12864 832 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 DENND5AQ6IQ26 1287 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 WDR93Q6P2C0 686 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 RANBP10Q6VN20 620 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 PDIK1LQ8N165 341 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 ZCCHC9Q8N567 271 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 UHMK1Q8TAS1 419 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 TADA1Q96BN2 335 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 MSANTD3Q96H12 275 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 TRIB3Q96RU7 358 aa15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 EIF2B3Q9NR50 452 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-202ENST00000318007 PIAS1O75925 651 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 PGLSO95336 258 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 CPP00450 1065 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 PXNP49023 591 aaPredicted RBP15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 ARL4CP56559 192 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 FAM193AP78312 1265 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 SATB1Q01826 763 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 PTPRCAPQ14761 206 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 FBXO43Q4G163 708 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 GANCQ8TET4 914 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 HMGB4Q8WW32 186 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 CFAP36Q96G28 342 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 ZNF778Q96MU6 729 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 HHIPQ96QV1 700 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 WDR83Q9BRX9 315 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 SERGEFQ9UGK8 458 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 SUN2Q9UH99 717 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 GGT7Q9UJ14 662 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 MRPS17Q9Y2R5 130 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 ARL5AQ9Y689 179 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 NCOR1O75376 2440 aa15.5■□□□□ 0.07
PDLIM5-202ENST00000318007 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 LOC285095A0A1B0GVY8 99 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PRR23AA6NEV1 266 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ERI2A8K979 691 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ANKRD66B4E2M5 251 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CCL22O00626 93 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 SUN1O94901 812 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms