RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 KAT6BQ8WYB5 2073 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 IGKV6-21A0A0C4DH24 114 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TARM1B6A8C7 271 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 XPOTO43592 962 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SEC14L2O76054 403 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PSMB4P28070 264 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MSX2P35548 267 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MVKQ03426 396 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PMS2P3Q13401 168 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ACOX1Q15067 660 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KIAA0930Q6ICG6 404 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TUBA3EQ6PEY2 450 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ISLR2Q6UXK2 745 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DPH6Q7L8W6 267 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CNTN4Q8IWV2 1026 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF567Q8N184 647 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 UBA3Q8TBC4 463 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SPPL2BQ8TCT7 592 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PPP1R10Q96QC0 940 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MTG1Q9BT17 334 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SEZ6LQ9BYH1 1024 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PLEKHA5Q9HAU0 1116 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 IARS2Q9NSE4 1012 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 A3GALT2U3KPV4 340 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 FAM95CA0A1B0GW59 222 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CENPBD1B2RD01 187 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 H0Y626 953 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TK2O00142 265 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MRPS14O60783 128 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SEC24DO94855 1032 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TRIM16O95361 564 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC159P0C7I6 412 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NELFEP18615 380 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ITIH1P19827 911 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ARPC4P59998 168 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CLPPQ16740 277 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GOLGA7BQ2TAP0 167 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM26Q6ZUK4 368 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC15A3Q8IY34 581 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LRRC52Q8N7C0 313 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PDZD8Q8NEN9 1154 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NAV1Q8NEY1 1877 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC35F5Q8WV83 523 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD4Q8WVF5 259 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ATG4CQ96DT6 458 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KLHL25Q9H0H3 589 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 INIPQ9NRY2 104 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ZDHHC2Q9UIJ5 367 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TRAF6Q9Y4K3 522 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TLL2Q9Y6L7 1015 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TBKBP1A7MCY6 615 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 EEF2KO00418 725 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GRAP2O75791 330 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CHEK2O96017 543 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NPPAP01160 153 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ITGB3P05106 788 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PCSK2P16519 638 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TCF7P36402 384 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CSRP3P50461 194 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ADARB1P78563 741 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RALGDSQ12967 914 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM132DQ14C87 1099 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SKIV2LQ15477 1246 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NEDD8Q15843 81 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SEZ6Q53EL9 994 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DCAF15Q66K64 600 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 OGFOD2Q6N063 350 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ARMCX2Q7L311 632 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LRRC49Q8IUZ0 686 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DCP1BQ8IZD4 617 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LSMEM2Q8N112 164 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PARP8Q8N3A8 854 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 FAM156AQ8NDB6 213 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PAPD5Q8NDF8 572 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SETD9Q8NE22 299 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NFKBIZQ9BYH8 718 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SPC25Q9HBM1 224 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF639Q9UID6 485 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KRBA1A5PL33 1030 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 C19orf81C9J6K1 198 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 M0QX08 132 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ADAM23O75077 832 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GSNP06396 782 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LTA4HP09960 611 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC35E2BP0CK96 405 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ATP6V1B2P21281 511 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC6A2P23975 617 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 IL12AP29459 219 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CD40LGP29965 261 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CLCN5P51795 746 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LAMTOR4Q0VGL1 99 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CYP2A13Q16696 494 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 METTL7BQ6UX53 244 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NANOGNBQ7Z5D8 188 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC51AQ86UW1 340 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 IFNLR1Q8IU57 520 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms