RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ACOT9Q9Y305 439 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 CARNS1A5YM72 827 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 TGM5O43548 720 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 BAIAP3O94812 1187 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 STMN1P16949 149 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 HDCP19113 662 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 SCNN1BP51168 640 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 CYTH1Q15438 398 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 ITIH5Q86UX2 942 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 ALYREFQ86V81 257 aaKnown RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 RNF135Q8IUD6 432 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 CENPLQ8N0S6 344 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 OR6P1Q8NGX9 317 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 PIWIL2Q8TC59 973 aaKnown RBP18.5■□□□□ 0.55
CCDC43-201ENST00000315286 TRIB3Q96RU7 358 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 MUC3BQ9H195 1237 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 SAR1AQ9NR31 198 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 MAFFQ9ULX9 164 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 ARL5AQ9Y689 179 aa18.5■□□□□ 0.55
CCDC43-201ENST00000315286 SLC7A4O43246 635 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 BUD23O43709 281 aaKnown RBP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 GREM1O60565 184 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 TBL1XO60907 577 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 C1RP00736 705 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 SBK3P0C264 359 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 PIRTP0C851 137 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 CTSAP10619 480 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 LEPRP48357 1165 aaKnown RBP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 ABCE1P61221 599 aaKnown RBP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 PTPRCAPQ14761 206 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 PABPC1LQ4VXU2 614 aaKnown RBP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 FSCBQ5H9T9 825 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 RBM20Q5T481 1227 aaKnown RBP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 NAPRTQ6XQN6 538 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 OMDQ99983 421 aa18.49■□□□□ 0.55
CCDC43-201ENST00000315286 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC43-201ENST00000315286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 OR51F1A6NGY5 319 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 TK2O00142 265 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 NDST3O95803 873 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 OLFM2O95897 454 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 KRT16P08779 473 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 LINC00271P0C7V0 271 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 COL6A2P12110 1019 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CR2P20023 1033 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 GLRBP48167 497 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 PRAMEP78395 509 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 ARF5P84085 180 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 RFTN1Q14699 578 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 TTC7BQ86TV6 843 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 LDB1Q86U70 411 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CILP2Q8IUL8 1156 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 GPR65Q8IYL9 337 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 SLC7A6OSQ96CW6 309 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 TBATAQ96M53 351 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 TSNARE1Q96NA8 513 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 NDNQ99608 321 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 MFSD1Q9H3U5 465 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 SUDS3Q9H7L9 328 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CPQQ9Y646 472 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 DENND4CQ5VZ89 1909 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 ZBBXA8MT70 800 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 FCHO1O14526 889 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 INSIG1O15503 277 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 GABRR2P28476 465 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CRABP2P29373 138 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CYP4F8P98187 520 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 POU4F1Q01851 419 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 DLG1Q12959 904 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 GAREM2Q75VX8 874 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 LCA5Q86VQ0 697 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 WDR75Q8IWA0 830 aaKnown RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 SPATA6LQ8N4H0 392 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 CARNMT1Q8N4J0 409 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 TTC16Q8NEE8 873 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 BRSK1Q8TDC3 778 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 NXNL1Q96CM4 212 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 SCYL1Q96KG9 808 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 GPR78Q96P69 363 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 EBF4Q9BQW3 602 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 NMUR2Q9GZQ4 415 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 WWP1Q9H0M0 922 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 LRMDAQ9H2I8 198 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 IL23AQ9NPF7 189 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 ARL8BQ9NVJ2 186 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 PNPOQ9NVS9 261 aa18.48■□□□□ 0.55
CCDC43-201ENST00000315286 MARCH4Q9P2E8 410 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-201ENST00000315286 ANKRD36A6QL64 1941 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 H0Y626 953 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 SNAP91O60641 907 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 TRIM13O60858 407 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 LATS1O95835 1130 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 CD160O95971 181 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 APOA4P06727 396 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 MZF1P28698 734 aaPredicted RBP18.47■□□□□ 0.55
CCDC43-201ENST00000315286 ACVR1Q04771 509 aa18.47■□□□□ 0.55
CCDC43-201ENST00000315286 LINGO4Q6UY18 593 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms