RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DAPK3O43293 454 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 MMP20O60882 483 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 LDOC1O95751 146 aaPredicted RBP20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 CD48P09326 243 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 CR2P20023 1033 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 RAD51Q06609 339 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 SLC10A7Q0GE19 358 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 SLC18A3Q16572 532 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 UGP2Q16851 508 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 ATP13A4Q4VNC1 1196 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 PTAR1Q7Z6K3 402 aaPredicted RBP20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 SRLQ86TD4 932 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 LZTR1Q8N653 840 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 PSKH2Q96QS6 385 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 MBNL1Q9NR56 388 aaKnown RBP20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 COL27A1Q8IZC6 1860 aaPredicted RBP20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 LY6G6EA0A0G2JKS1 128 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 TMEM8BA6NDV4 472 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 MAFKO60675 156 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 PALMO75781 387 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 MMP12P39900 470 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 NSUN2Q08J23 767 aaKnown RBP eCLIP20.01■□□□□ 0.792e-11■■■■■ 49.2
PDZRN3-202ENST00000308537 EIF2B5Q13144 721 aaKnown RBP20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 RFTN1Q14699 578 aaPredicted RBP20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF542PQ5EBM4 170 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 DHRS13Q6UX07 377 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 PGBD5Q8N414 524 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 OR8K1Q8NGG5 319 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF564Q8TBZ8 553 aaPredicted RBP20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 SPOCK2Q92563 424 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF641Q96N77 438 aaPredicted RBP20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 TUBGCP5Q96RT8 1024 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 CHP1Q99653 195 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 SP110Q9HB58 689 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 PCDH12Q9NPG4 1184 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 U3KQA8 63 aa20.01■□□□□ 0.79
PDZRN3-202ENST00000308537 FAM208BQ5VWN6 2430 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 SSU72P8A0A1W2PR75 194 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 RIOK3O14730 519 aaKnown RBP20■□□□□ 0.79
PDZRN3-202ENST00000308537 SIGLEC6O43699 453 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 NME1P15531 152 aaKnown RBP20■□□□□ 0.79
PDZRN3-202ENST00000308537 GM2AP17900 193 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 ARL4AP40617 200 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 RABIFP47224 123 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 SUOXP51687 545 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 CLDN6P56747 220 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 TAS2R40P59535 323 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 RALGDSQ12967 914 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 MMRN1Q13201 1228 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 GRM3Q14832 879 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 AGERQ15109 404 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 DCP2Q8IU60 420 aaKnown RBP20■□□□□ 0.79
PDZRN3-202ENST00000308537 RNF214Q8ND24 703 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 OR4C6Q8NH72 309 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF599Q96NL3 588 aa20■□□□□ 0.79
PDZRN3-202ENST00000308537 WRAP53Q9BUR4 548 aaKnown RBP20■□□□□ 0.79
PDZRN3-202ENST00000308537 MYO1FO00160 1098 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 NEMP1O14524 444 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 FPGTO14772 594 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 MFAP3LO75121 409 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 TM7SF2O76062 418 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 PROSCO94903 275 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 CSF2P04141 144 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 PRKCGP05129 697 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 SGCGQ13326 291 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF211Q13398 564 aaPredicted RBP19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 DPYSL3Q14195 570 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 LBRQ14739 615 aaKnown RBP19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 TMCO4Q5TGY1 634 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 BRAT1Q6PJG6 821 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 TMCO3Q6UWJ1 677 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 ZCCHC14Q8WYQ9 949 aaKnown RBP19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 CINPQ9BW66 212 aaPredicted RBP19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 ABHD10Q9NUJ1 306 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 RCOR3Q9P2K3 495 aaPredicted RBP19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 COQ6Q9Y2Z9 468 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 RP1P56715 2156 aa19.99■□□□□ 0.79
PDZRN3-202ENST00000308537 TTC24A2A3L6 582 aaPredicted RBP19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 FAM149AA5PLN7 773 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 CBFA2T2O43439 604 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 RFPL3O75679 317 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 TPM3P06753 285 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 C1SP09871 688 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 C6P13671 934 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 ACP1P24666 158 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 CDH6P55285 790 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 SEMG2Q02383 582 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 TBX2Q13207 712 aaPredicted RBP19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 PDE1CQ14123 709 aaPredicted RBP19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 TRIM14Q14142 442 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 WSCD2Q2TBF2 565 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 NYAP1Q6ZVC0 841 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 PARGQ86W56 976 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 PCDH19Q8TAB3 1148 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 FAF2Q96CS3 445 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 TCEAL2Q9H3H9 227 aaPredicted RBP19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 UVRAGQ9P2Y5 699 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 SEPT3Q9UH03 358 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms