RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ACDQ96AP0 544 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ZNF669Q96BR6 464 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 MFSD3Q96ES6 412 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NUDCD1Q96RS6 583 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TRIB3Q96RU7 358 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 MYADMQ96S97 322 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CYTH2Q99418 400 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 UGT1A7Q9HAW7 530 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 UGT1A10Q9HAW8 530 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 UGT1A8Q9HAW9 530 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SCUBE2Q9NQ36 999 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FAM86C1Q9NVL1 165 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 LMCD1Q9NZU5 365 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SAMD15Q9P1V8 674 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FETUBQ9UGM5 382 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC24A2Q9UI40 661 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 GGA2Q9UJY4 613 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CDH7Q9ULB5 785 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 RPS6KL1Q9Y6S9 549 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FAM237BA0A1B0GVD1 139 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 OTOL1A6NHN0 477 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 AP3B1O00203 1094 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 DCXO43602 365 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FAM155BO75949 473 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 USP1O94782 785 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PRLP01236 227 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PRKCGP05129 697 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SERPINF2P08697 491 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ADH5P11766 374 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PABPC1P11940 636 aaKnown RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CREB1P16220 341 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 HOXB8P17481 243 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NR1D1P20393 614 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 RHOAP61586 193 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CDK18Q07002 472 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC12A1Q13621 1099 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 GALNT3Q14435 633 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TERF2Q15554 542 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC14A2Q15849 920 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 GAB4Q2WGN9 574 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PCID2Q5JVF3 399 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SPANXN3Q5MJ09 141 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NCEH1Q6PIU2 408 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ADGRD1Q6QNK2 874 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 VITQ6UXI7 678 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 KIAA0907Q7Z7F0 614 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ADIPOR2Q86V24 386 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 EXOC3L1Q86VI1 746 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CCNJLQ8IV13 435 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 RIBC1Q8N443 379 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FAM76AQ8TAV0 307 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC44A1Q8WWI5 657 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FEM1CQ96JP0 617 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 RPL10LQ96L21 214 aaKnown RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NAT9Q9BTE0 207 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 KIFC1Q9BW19 673 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PLA2G2FQ9BZM2 168 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 OBP2AQ9NY56 170 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 PSMC3IPQ9P2W1 217 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TCAF1Q9Y4C2 921 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 POLBP06746 335 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PDHA1P08559 390 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CISD3P0C7P0 127 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SRCP12931 536 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 HPDP32754 393 aaPredicted RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 NSUN2Q08J23 767 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MESP2Q0VG99 397 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TRAF2Q12933 501 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 COL19A1Q14993 1142 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 RASA2Q15283 850 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 DGKKQ5KSL6 1271 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 ATAT1Q5SQI0 421 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 RETSATQ6NUM9 610 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PKN3Q6P5Z2 889 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 KDM7AQ6ZMT4 941 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CYS1Q717R9 158 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PPM1NQ8N819 430 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TTC17Q96AE7 1141 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 VOPP1Q96AW1 172 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 CERS2Q96G23 380 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 MSLNLQ96KJ4 702 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TDRD1Q9BXT4 1180 aaKnown RBP7.02□□□□□ -1.29
PTCD2-201ENST00000308077 TM6SF2Q9BZW4 377 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 EBF3Q9H4W6 596 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 POMKQ9H5K3 350 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PPCSQ9HAB8 311 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 HPS4Q9NQG7 708 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 PRKAG3Q9UGI9 489 aa7.02□□□□□ -1.29
PTCD2-201ENST00000308077 SLC2A6Q9UGQ3 507 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms