RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GPR152Q8TDT2 470 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 PCDHA2Q9Y5H9 948 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SLC28A1O00337 649 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 ELNP15502 786 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 FLT3P36888 993 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 MARK2Q7KZI7 788 aaKnown RBP16.03■□□□□ 0.16
USP42-201ENST00000306177 TNS4Q8IZW8 715 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 LRRC4CQ9HCJ2 640 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 A0A1W2PQH9 124 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 TRIM24O15164 1050 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 ZW10O43264 779 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 CYP3A5P20815 502 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 OR1D2P34982 312 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 TALDO1P37837 337 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 SPIDRQ14159 915 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 TEX44Q53QW1 395 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 KRT73Q86Y46 540 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 CAMK1DQ8IU85 385 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 ZNF655Q8N720 491 aaPredicted RBP16.03■□□□□ 0.16
USP42-201ENST00000306177 TBC1D10AQ9BXI6 508 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 VWA7Q9Y334 891 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 LRCH4O75427 683 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 BCL10O95999 233 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 EIF2S1P05198 315 aaKnown RBP16.03■□□□□ 0.16
USP42-201ENST00000306177 EPS8Q12929 822 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 MAPKAPK3Q16644 382 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 SPRYD7Q5W111 196 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 FGD2Q7Z6J4 655 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 C10orf107Q8IVU9 208 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 OR52K2Q8NGK3 314 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 STMN3Q9NZ72 180 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 COG5Q9UP83 839 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 ABCC6O95255 1503 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 A0A1W2PPM1 405 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 PAICSP22234 425 aaKnown RBP16.03■□□□□ 0.16
USP42-201ENST00000306177 GSSP48637 474 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 CEP78Q5JTW2 689 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 CDYL2Q8N8U2 506 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 NETO2Q8NC67 525 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 FBXO30Q8TB52 745 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 C12orf42Q96LP6 360 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 KLHL5Q96PQ7 755 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 R3HDM2Q9Y2K5 976 aaKnown RBP16.03■□□□□ 0.16
USP42-201ENST00000306177 SLIT2O94813 1529 aa16.03■□□□□ 0.16
USP42-201ENST00000306177 NT5C1B-RDH14C9J2C7 533 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 FFAR3O14843 346 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 GPR42O15529 346 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 HGFP14210 728 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 CRATP43155 626 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 VN1R5Q7Z5H4 357 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 NACC2Q96BF6 587 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 MAML3Q96JK9 1138 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 PSME2Q9UL46 239 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 ZNF214Q9UL59 606 aaPredicted RBP16.02■□□□□ 0.16
USP42-201ENST00000306177 ATRNL1Q5VV63 1379 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 CLDN11O75508 207 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 CTPS1P17812 591 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 CDC25CP30307 473 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 MC4RP32245 332 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 TSNQ15631 228 aaKnown RBP16.02■□□□□ 0.16
USP42-201ENST00000306177 ERLEC1Q96DZ1 483 aa16.02■□□□□ 0.16
USP42-201ENST00000306177 GPR25O00155 361 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 AZIN1O14977 448 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 PTP4A2Q12974 167 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 NEDD8Q15843 81 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 SLC24A5Q71RS6 500 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 BNIPLQ7Z465 357 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 RBFAQ8N0V3 343 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 IRGQQ8WZA9 623 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 NDOR1Q9UHB4 597 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 PCDHB9Q9Y5E1 797 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 A0A087WXM4 84 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 A0A0G2JLL6 359 aaPredicted RBP16.02■□□□□ 0.15
USP42-201ENST00000306177 TRIM38O00635 465 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 MSI1O43347 362 aaKnown RBP16.02■□□□□ 0.15
USP42-201ENST00000306177 ASGR1P07306 291 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 GRIA3P42263 894 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 ENPEPQ07075 957 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 TAF10Q12962 218 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 PRRT2Q7Z6L0 340 aaPredicted RBP16.02■□□□□ 0.15
USP42-201ENST00000306177 ZNF605Q86T29 641 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 SPATA6LQ8N4H0 392 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 SLC4A11Q8NBS3 891 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 PTCD3Q96EY7 689 aaKnown RBP16.02■□□□□ 0.15
USP42-201ENST00000306177 KCTD15Q96SI1 283 aaPredicted RBP16.02■□□□□ 0.15
USP42-201ENST00000306177 SLCO1B3Q9NPD5 702 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 BTRCQ9Y297 605 aa16.02■□□□□ 0.15
USP42-201ENST00000306177 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 RPL38P63173 70 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 DUSP4Q13115 394 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 UBAP2LQ14157 1087 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 ZNF549Q6P9A3 640 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 TRAF7Q6Q0C0 670 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 SLC26A9Q7LBE3 791 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms