RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TRAF2Q12933 501 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 RALGPS1Q5JS13 557 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 NLRP9Q7RTR0 991 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 CNTN4Q8IWV2 1026 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 OR13J1Q8NGT2 312 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 RMDN1Q96DB5 314 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 TM6SF2Q9BZW4 377 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 NSMCE4AQ9NXX6 385 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 MARK1Q9P0L2 795 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 COPEO14579 308 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 TM9SF1O15321 606 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 VIPR2P41587 438 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 CTSOP43234 321 aaPredicted RBP23.01■■□□□ 1.27
PTX3-201ENST00000295927 LIMK2P53671 638 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 CNPY4Q8N129 248 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 BRSK1Q8TDC3 778 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 ZNF317Q96PQ6 595 aaPredicted RBP23.01■■□□□ 1.27
PTX3-201ENST00000295927 CCT8L2Q96SF2 557 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 MCMBPQ9BTE3 642 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 C12orf65Q9H3J6 166 aaKnown RBP23.01■■□□□ 1.27
PTX3-201ENST00000295927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTX3-201ENST00000295927 SLC17A7Q9P2U7 560 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 CDH22Q9UJ99 828 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 GGA2Q9UJY4 613 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 KCTD3Q9Y597 815 aa23.01■■□□□ 1.27
PTX3-201ENST00000295927 ALDOAP04075 364 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 PDE1BQ01064 536 aa23■■□□□ 1.27
PTX3-201ENST00000295927 IL9RQ01113 521 aa23■■□□□ 1.27
PTX3-201ENST00000295927 THOC5Q13769 683 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 FAM78AQ5JUQ0 283 aa23■■□□□ 1.27
PTX3-201ENST00000295927 LVRNQ6Q4G3 990 aa23■■□□□ 1.27
PTX3-201ENST00000295927 MICALCLQ6ZW33 695 aa23■■□□□ 1.27
PTX3-201ENST00000295927 GPR149Q86SP6 731 aa23■■□□□ 1.27
PTX3-201ENST00000295927 METTL3Q86U44 580 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 ZNF557Q8N988 423 aaPredicted RBP23■■□□□ 1.27
PTX3-201ENST00000295927 LPCAT1Q8NF37 534 aa23■■□□□ 1.27
PTX3-201ENST00000295927 TIFAQ96CG3 184 aa23■■□□□ 1.27
PTX3-201ENST00000295927 CHMP6Q96FZ7 201 aa23■■□□□ 1.27
PTX3-201ENST00000295927 ATXN7L3BQ96GX2 97 aa23■■□□□ 1.27
PTX3-201ENST00000295927 RPL10LQ96L21 214 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 PCMTD2Q9NV79 361 aa23■■□□□ 1.27
PTX3-201ENST00000295927 GGT7Q9UJ14 662 aa23■■□□□ 1.27
PTX3-201ENST00000295927 ARL5AQ9Y689 179 aa23■■□□□ 1.27
PTX3-201ENST00000295927 TPP1O14773 563 aa23■■□□□ 1.27
PTX3-201ENST00000295927 LINC01565O15544 149 aa23■■□□□ 1.27
PTX3-201ENST00000295927 SIN3BO75182 1162 aa23■■□□□ 1.27
PTX3-201ENST00000295927 PABPC1P11940 636 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 ABCG1P45844 678 aa23■■□□□ 1.27
PTX3-201ENST00000295927 STK19P49842 368 aaPredicted RBP23■■□□□ 1.27
PTX3-201ENST00000295927 AP1S1P61966 158 aa23■■□□□ 1.27
PTX3-201ENST00000295927 HYAL1Q12794 435 aa23■■□□□ 1.27
PTX3-201ENST00000295927 LAMB3Q13751 1172 aa23■■□□□ 1.27
PTX3-201ENST00000295927 SEPT7Q16181 437 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 HHATQ5VTY9 493 aa23■■□□□ 1.27
PTX3-201ENST00000295927 DENND6AQ8IWF6 608 aa23■■□□□ 1.27
PTX3-201ENST00000295927 DCLK2Q8N568 766 aa23■■□□□ 1.27
PTX3-201ENST00000295927 PDCD6IPQ8WUM4 868 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 FGF13Q92913 245 aa23■■□□□ 1.27
PTX3-201ENST00000295927 PTPRN2Q92932 1015 aa23■■□□□ 1.27
PTX3-201ENST00000295927 FAM107BQ9H098 131 aa23■■□□□ 1.27
PTX3-201ENST00000295927 DUS2Q9NX74 493 aaKnown RBP23■■□□□ 1.27
PTX3-201ENST00000295927 GRID1Q9ULK0 1009 aa23■■□□□ 1.27
PTX3-201ENST00000295927 SPO11Q9Y5K1 396 aa23■■□□□ 1.27
PTX3-201ENST00000295927 CXorf51AA0A1B0GTR3 108 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 FAM107AO95990 144 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 FSTL4Q6MZW2 842 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 CDHR3Q6ZTQ4 885 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 NDUFAF2Q8N183 169 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 MAGEB18Q96M61 343 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 ASB16Q96NS5 453 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 SRPK1Q96SB4 655 aaKnown RBP22.99■■□□□ 1.27
PTX3-201ENST00000295927 ADGRE3Q9BY15 652 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 SLC13A1Q9BZW2 595 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 MKS1Q9NXB0 559 aa22.99■■□□□ 1.27
PTX3-201ENST00000295927 MTO1Q9Y2Z2 717 aaKnown RBP22.99■■□□□ 1.27
PTX3-201ENST00000295927 NDUFAB1O14561 156 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 TIMM44O43615 452 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 ZNF821O75541 412 aaPredicted RBP22.98■■□□□ 1.27
PTX3-201ENST00000295927 SRCP12931 536 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 CTBP1Q13363 440 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 DHCR24Q15392 516 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 TCEAL5Q5H9L2 206 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 DGKKQ5KSL6 1271 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 NEPROQ6NW34 567 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 TMEM184AQ6ZMB5 413 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 GET4Q7L5D6 327 aaPredicted RBP22.98■■□□□ 1.27
PTX3-201ENST00000295927 KIAA1958Q8N8K9 716 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 NAT16Q8N8M0 369 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 OR6K2Q8NGY2 324 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 ACMSDQ8TDX5 336 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 OSCP1Q8WVF1 389 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 FAM167BQ9BTA0 163 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 TNKS2Q9H2K2 1166 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 NSUN3Q9H649 340 aaKnown RBP22.98■■□□□ 1.27
PTX3-201ENST00000295927 EVLQ9UI08 416 aaPredicted RBP22.98■■□□□ 1.27
PTX3-201ENST00000295927 HS3ST2Q9Y278 367 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 ANKRD66B4E2M5 251 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 CCL22O00626 93 aa22.98■■□□□ 1.27
PTX3-201ENST00000295927 BUD23O43709 281 aaKnown RBP22.98■■□□□ 1.27
PTX3-201ENST00000295927 AHSGP02765 367 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms