RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ALBP02768 609 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
UBR1-201ENST00000290650 BNIP1Q12981 228 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 SLC9B1Q4ZJI4 515 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 CCDC92Q53HC0 331 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 TEX44Q53QW1 395 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ARL13AQ5H913 290 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 NCBP2-AS2Q69YL0 99 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 MAGEE2Q8TD90 523 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 HAUS8Q9BT25 410 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 TMEM106CQ9BVX2 250 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ACAT2Q9BWD1 397 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 AAASQ9NRG9 546 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ZMYND8Q9ULU4 1186 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 ANKRD31Q8N7Z5 1873 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 MAGEA13PA6NCF6 341 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 J3KR12 359 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 SIN3BO75182 1162 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ZBTB11O95625 1053 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 VAC14Q08AM6 782 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ABRQ12979 859 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 MADCAM1Q13477 382 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 CPSF6Q16630 551 aaKnown RBP eCLIP4.82□□□□□ -1.64
UBR1-201ENST00000290650 CYP1B1Q16678 543 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 C6orf52Q5T4I8 152 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 RNF220Q5VTB9 566 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 NT5DC4Q86YG4 428 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 CCNJLQ8IV13 435 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 TMEM86AQ8N2M4 240 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 B4GALNT2Q8NHY0 566 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 RELTQ969Z4 430 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 FOPNLQ96NB1 174 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ZNF317Q96PQ6 595 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 ADAM7Q9H2U9 754 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 FCF1Q9Y324 198 aaKnown RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 NDUFAF1Q9Y375 327 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 TLL2Q9Y6L7 1015 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ZFP37Q9Y6Q3 630 aaPredicted RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 TRIP12Q14669 1992 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 PSMD12O00232 456 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 CD3EAPO15446 510 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 TBC1D4O60343 1298 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 TIPRLO75663 272 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CLPTM1O96005 669 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 RBP1P09455 135 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ACRP10323 421 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 VAV1P15498 845 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 LSM3P62310 102 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 SOX4Q06945 474 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 TRMT5Q32P41 509 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 GPRIN1Q7Z2K8 1008 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 LRRC52Q8N7C0 313 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ARRDC4Q8NCT1 418 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 DCAKDQ8WVC6 231 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 TMEM40Q8WWA1 233 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CRYGNQ8WXF5 182 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 NKD2Q969F2 451 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 LINGO1Q96FE5 620 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 DNAJC1Q96KC8 554 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 QKIQ96PU8 341 aaKnown RBP eCLIP4.81□□□□□ -1.644e-8■■■■■ 33.1
UBR1-201ENST00000290650 ZNF184Q99676 751 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 SLC4A5Q9BY07 1137 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CROTQ9UKG9 612 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 GABRQQ9UN88 632 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CYP4B1P13584 511 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 HGFP14210 728 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 MC4RP32245 332 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 WASP42768 502 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 RPS24P62847 133 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 SMAD3P84022 425 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 BCL2L1Q07817 233 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ZNF252P-AS1Q0IIN9 211 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SLC10A2Q12908 348 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 BFSP2Q13515 415 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 MFSD5Q6N075 450 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ZNF366Q8N895 744 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CASP10Q92851 521 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 FBXL18Q96ME1 805 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SH3GL3Q99963 347 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 DGCR6LQ9BY27 220 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SMG9Q9H0W8 520 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 CCDC134Q9H6E4 229 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ARL15Q9NXU5 204 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 KCTD3Q9Y597 815 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CLUHO75153 1309 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 MAGEB16A2A368 324 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 MTA2O94776 668 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 LTA4HP09960 611 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 CRABP2P29373 138 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CHI3L1P36222 383 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 MRPS35P82673 323 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 PLPP4Q5VZY2 271 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SMYD5Q6GMV2 418 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ZNF621Q6ZSS3 439 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 STK32CQ86UX6 486 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms