RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 FAM171A1Q5VUB5 890 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 PLEKHF1Q96S99 279 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 MAGEC1O60732 1142 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 VAPBO95292 243 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 PGAM2P15259 253 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 HSD17B2P37059 387 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 ALG10BQ5I7T1 473 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 SNIP1Q8TAD8 396 aaKnown RBP13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 RIT1Q92963 219 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 POLR1EQ9GZS1 481 aaKnown RBP13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 PLCL2Q9UPR0 1127 aa13.29□□□□□ -0.28
SMARCA5-201ENST00000283131 TPH1P17752 444 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MANFP55145 182 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 XKR6Q5GH73 641 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 KCTD8Q6ZWB6 473 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 SLC34A3Q8N130 599 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 GRIN3AQ8TCU5 1115 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 EDEM1Q92611 657 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 C2orf49Q9BVC5 232 aaPredicted RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 CXorf57Q6NSI4 855 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 OXNAD1Q96HP4 312 aaPredicted RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 HPF1Q9NWY4 346 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 VTNP04004 478 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 NAA20P61599 178 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 NR1I3Q14994 352 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ANKRD13AQ8IZ07 590 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 SIPA1Q96FS4 1042 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 PPP3R2Q96LZ3 170 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 CCNB1IP1Q9NPC3 277 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 PDCD5O14737 125 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ALOX5P09917 674 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MMP13P45452 471 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 TOB2Q14106 344 aaPredicted RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 SHC4Q6S5L8 630 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ZSWIM2Q8NEG5 633 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 GPR156Q8NFN8 814 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 SUN3Q8TAQ9 357 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 PHB2Q99623 299 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MED11Q9P086 117 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MID1O15344 667 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 NDUFB10O96000 172 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 FOSL1P15407 271 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 VPS26BQ4G0F5 336 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 SLC35G4P0C7Q5 338 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MGAT1P26572 445 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 CDK9P50750 372 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 MAPK14Q16539 360 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 GLS2Q9UI32 602 aa13.28□□□□□ -0.28
SMARCA5-201ENST00000283131 TRAV19A0A0A6YYK7 116 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 MCL1Q07820 350 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 ANXA8L1Q5VT79 327 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 SNX33Q8WV41 574 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 ERMAPQ96PL5 475 aaPredicted RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 IRX2Q9BZI1 471 aaPredicted RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 MTRRQ9UBK8 725 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 PSMD9O00233 223 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 OR3A3P47888 321 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 OR3A2P47893 321 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 DPYSQ14117 519 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 SPESP1Q6UW49 350 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 SP8Q8IXZ3 490 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 OR4A15Q8NGL6 344 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 PHF12Q96QT6 1004 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 FANCFQ9NPI8 374 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 APOL3O95236 402 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 KAT7O95251 611 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 FBXO47Q5MNV8 452 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 CMTR2Q8IYT2 770 aaKnown RBP13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 OR8H1Q8NGG4 311 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 SNCAIPQ9Y6H5 919 aa13.27□□□□□ -0.28
SMARCA5-201ENST00000283131 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms