RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TLK1Q9UKI8 766 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 OR51B4Q9Y5P0 310 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 NRG2O14511 850 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 DNAJC6O75061 913 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 RALBP11234 206 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 COL6A2P12110 1019 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 SAT1P21673 171 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 GRK2P25098 689 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 SLC1A6P48664 564 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 TAS2R39P59534 338 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 SLC12A1Q13621 1099 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 CTC1Q2NKJ3 1217 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 TAF1BQ53T94 588 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 ZNF789Q5FWF6 425 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 FBXW10Q5XX13 1052 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 CNSTQ6PJW8 725 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 CLNKQ7Z7G1 428 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 CILP2Q8IUL8 1156 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 BRSK1Q8TDC3 778 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 HDAC10Q969S8 669 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 EXOC2Q96KP1 924 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 SLC40A1Q9NP59 571 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 FBXO6Q9NRD1 293 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-201ENST00000269318 INSL6Q9Y581 213 aa16.74■□□□□ 0.27
CCDC40-201ENST00000269318 C2orf71A6NGG8 1288 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CCL22O00626 93 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SNAP91O60641 907 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LYPLA1O75608 230 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LUC7L3O95232 432 aaKnown RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LRG1P02750 347 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 C8AP07357 584 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SBK3P0C264 359 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 T-ENOLP0DO92 83 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 STMN1P16949 149 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 MZF1P28698 734 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CRABP2P29373 138 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ARRB2P32121 409 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 AVPR1AP37288 418 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SCNN1BP51168 640 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SLC7A9P82251 487 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LAMB3Q13751 1172 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ZNF460Q14592 562 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CCDC149Q6ZUS6 474 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CARNMT1Q8N4J0 409 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 BLOC1S5Q8TDH9 187 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 MRPS31Q92665 395 aaKnown RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 GPR78Q96P69 363 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SORT1Q99523 831 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ZFP69BQ9UJL9 534 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 RIMKLBQ9ULI2 386 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ARL5AQ9Y689 179 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LAMA2P24043 3122 aaKnown RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CFAP73A6NFT4 308 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 H0Y626 953 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 PRLP01236 227 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 APOA4P06727 396 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ADH1AP07327 375 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 CES1P23141 567 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SERPINB3P29508 390 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 POU4F1Q01851 419 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■□□ 15
CCDC40-201ENST00000269318 ITGA9Q13797 1035 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 TMC7Q7Z402 723 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 PTAR1Q7Z6K3 402 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 LMNTD2Q8IXW0 634 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 MAB21L3Q8N8X9 362 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 KREMEN2Q8NCW0 462 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 GABPB2Q8TAK5 448 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 KCTD4Q8WVF5 259 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 TMA16Q96EY4 203 aaKnown RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ALG14Q96F25 216 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ELMO2Q96JJ3 720 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 NUDCD1Q96RS6 583 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 OMDQ99983 421 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 FEM1AQ9BSK4 669 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 TDRD1Q9BXT4 1180 aaKnown RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 SCUBE2Q9NQ36 999 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 TXLNGQ9NUQ3 528 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 MARCOQ9UEW3 520 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ACOT9Q9Y305 439 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 ARIH1Q9Y4X5 557 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-201ENST00000269318 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
CCDC40-201ENST00000269318 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 TMCC1O94876 653 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 CLCN5P51795 746 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 ERVFC1P60507 584 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 PRAMEP78395 509 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
CCDC40-201ENST00000269318 LINGO4Q6UY18 593 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 HTR3DQ70Z44 454 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 CCDC91Q7Z6B0 441 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 DNAJC5GQ8N7S2 189 aa16.72■□□□□ 0.27
CCDC40-201ENST00000269318 GPATCH11Q8N954 259 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms