RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TPSAB1Q15661 275 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 NFE2Q16621 373 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 STRADAQ7RTN6 431 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 MFSD3Q96ES6 412 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 MIPEPQ99797 713 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 POLG2Q9UHN1 485 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 COQ6Q9Y2Z9 468 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TOR1BO14657 336 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SERPINF2P08697 491 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 HOXC6P09630 235 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 PRIM2P49643 509 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TBX4P57082 545 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SP2Q02086 613 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 MSLNQ13421 630 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SLC10A6Q3KNW5 377 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SLC25A52Q3SY17 297 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 CTXN3Q4LDR2 81 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TIGD2Q4W5G0 525 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 PYROXD2Q8N2H3 581 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SPPL2AQ8TCT8 520 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 UGT2B28Q9BY64 529 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 PDZD7Q9H5P4 517 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 PRDM16Q9HAZ2 1276 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 BTN3A1O00481 513 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 RNASEH1O60930 286 aaKnown RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 ASPAP45381 313 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 ATXN1P54253 815 aaKnown RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF177Q13360 481 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SNX17Q15036 470 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 DDR2Q16832 855 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-201ENST00000267199 IQSEC1Q6DN90 963 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 FRMD7Q6ZUT3 714 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 UBR7Q8N806 425 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 CRYGNQ8WXF5 182 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TWNKQ96RR1 684 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TINF2Q9BSI4 451 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 CHID1Q9BWS9 393 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SPASTQ9UBP0 616 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 CHRNGP07510 517 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ADRA1BP35368 520 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 GRIA1P42261 906 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 GPD2P43304 727 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SLC11A2P49281 568 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 RAB10P61026 200 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CA9Q16790 459 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SLCO6A1Q86UG4 719 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 PHTF2Q8N3S3 785 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CRLS1Q9UJA2 301 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CCNT2O60583 730 aaKnown RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 LTA4HP09960 611 aaKnown RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 MOGSQ13724 837 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SPDYE7PQ495Y7 208 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SLC9B1Q4ZJI4 515 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 TRIM69Q86WT6 500 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 DRAXINQ8NBI3 349 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CMASQ8NFW8 434 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 KCTD15Q96SI1 283 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CHRAC1Q9NRG0 131 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 DNAJC28Q9NX36 388 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ITGB1BP2Q9UKP3 347 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 FBXO5Q9UKT4 447 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 PTPRJQ12913 1337 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 J3QRK9 145 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 LINC00032P0C843 101 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CYP4B1P13584 511 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 OR1E1P30953 314 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 MBTD1Q05BQ5 628 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 VPS37AQ8NEZ2 397 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 FBXL8Q96CD0 374 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 GPATCH1Q9BRR8 931 aaKnown RBP11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ACTR8Q9H981 624 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 MDM4O15151 490 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 EDIL3O43854 480 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 SH3BGRLO75368 114 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 H6PDO95479 791 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 METTL18O95568 372 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 EGFRP00533 1210 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 PIGRP01833 764 aa11.62□□□□□ -0.55
VPS33A-201ENST00000267199 ALDH4A1P30038 563 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms