RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CBY1Q9Y3M2 126 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 F5H6K3 240 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 OGTO15294 1046 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CPNE3O75131 537 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 FESP07332 822 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 GJA1P17302 382 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 RHOAP61586 193 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 KLRC3Q07444 240 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TFAP2DQ7Z6R9 452 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SATL1Q86VE3 508 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 EMILIN2Q9BXX0 1053 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CCNB1IP1Q9NPC3 277 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TUBG1P23258 451 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 NAMPTP43490 491 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 GRAPQ13588 217 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 A0A0A6YYK5 440 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 SNAP23O00161 211 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 IFNA7P01567 189 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 PRDX5P30044 214 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MSX2P35548 267 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 SETD6Q8TBK2 473 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TATDN2Q93075 761 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 NPAS2Q99743 824 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CATSPERZQ9NTU4 200 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 EGFL7Q9UHF1 273 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 NOL4O94818 638 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 C1orf94Q6P1W5 598 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SLC4A11Q8NBS3 891 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SLC5A5Q92911 643 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 NKD1Q969G9 470 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 ZMYM2Q9UBW7 1377 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 LINC00032P0C843 101 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 CDKL4Q5MAI5 379 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 DGLUCYQ7Z3D6 616 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 COMTD1Q86VU5 262 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ATCAYQ86WG3 371 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ATXN3LQ9H3M9 355 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 SLC28A2O43868 658 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 LRIG2O94898 1065 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 CCR1P32246 355 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 UGT1A5P35504 534 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 LIPEQ05469 1076 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 GPER1Q99527 375 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ZNF639Q9UID6 485 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 UMODL1Q5DID0 1318 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 SULT1B1O43704 296 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 GRIA4P48058 902 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 CDK9P50750 372 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 TXNL4AP83876 142 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 PDIA6Q15084 440 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 RAB12Q6IQ22 244 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ARL15Q9NXU5 204 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 MED11Q9P086 117 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 NAB1Q13506 487 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 MAGEE1Q9HCI5 957 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 GDF3Q9NR23 364 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ZNF225Q9UK10 706 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 AP3S2P59780 193 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 MXD1Q05195 221 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ZNF567Q8N184 647 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 CCDC86Q9H6F5 360 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 KIAA0556O60303 1618 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 MAGEB3O15480 346 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 NARSO43776 548 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 OR5T3Q8NGG3 340 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ATG10Q9H0Y0 220 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 I3L521 148 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 SMAD9O15198 467 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 AP5Z1O43299 807 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 RNASEH1O60930 286 aaKnown RBP11.22□□□□□ -0.61
CHFR-201ENST00000266880 LRG1P02750 347 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 NR2F1P10589 423 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 CRADDP78560 199 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 PRAMEF17Q5VTA0 474 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 EFCAB12Q6NXP0 572 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 HDDC3Q8N4P3 179 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 RNF31Q96EP0 1072 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
CHFR-201ENST00000266880 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms