RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CASKIN2Q8WXE0 1202 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 POLR1EQ9GZS1 481 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SUV39H2Q9H5I1 410 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 ATP13A3Q9H7F0 1226 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SGK2Q9HBY8 427 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SCML1Q9UN30 329 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 CACNA1AO00555 2505 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 METTL12A8MUP2 240 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF487B1APH4 448 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 RNGTTO60942 597 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ALPIP09923 528 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PIRTP0C851 137 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 RBP3P10745 1247 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZFXP17010 805 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 CCNCP24863 283 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PTPN3P26045 913 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 RBL1P28749 1068 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 CSNK1EP49674 416 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 RENBPP51606 427 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 EIF3EP60228 445 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 FAM193AP78312 1265 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 IRX4P78413 519 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 SNX1Q13596 522 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 HNRNPDQ14103 355 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 GALNT3Q14435 633 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 RFTN1Q14699 578 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRKD1Q15139 912 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 KIAA0895LQ68EN5 471 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRUNE1Q86TP1 453 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 VSIG1Q86XK7 387 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 MAML1Q92585 1016 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF599Q96NL3 588 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 QKIQ96PU8 341 aaKnown RBP eCLIP7.31□□□□□ -1.246e-6■□□□□ 8.8
DEPDC1B-201ENST00000265036 GTPBP2Q9BX10 602 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 AASDHPPTQ9NRN7 309 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 KLHL8Q9P2G9 620 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 PILRBQ9UKJ0 227 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZFR2Q9UPR6 939 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 CHKBQ9Y259 395 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ARIH1Q9Y4X5 557 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 FRYQ5TBA9 3013 aa7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 ARID1BQ8NFD5 2236 aaPredicted RBP7.31□□□□□ -1.24
DEPDC1B-201ENST00000265036 KCNN4O15554 427 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZSCAN12O43309 604 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 MMP20O60882 483 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 PMPCBO75439 489 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 PAK4O96013 591 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 ATP1A1P05023 1023 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 NFKB1P19838 968 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 GDF10P55107 478 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 CLDN2P57739 230 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 AP1S1P61966 158 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 WASHC5Q12768 1159 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 OLIG2Q13516 323 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FGL2Q14314 439 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 NOMO1Q15155 1222 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TCEA2Q15560 299 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 UGP2Q16851 508 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 C11orf74Q86VG3 221 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 SYT12Q8IV01 421 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 LPCAT1Q8NF37 534 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 C1orf54Q8WWF1 131 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 SERAC1Q96JX3 654 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TSGA13Q96PP4 275 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 NUDCD1Q96RS6 583 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 OSBPL1AQ9BXW6 950 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 RAI2Q9Y5P3 530 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FADS3Q9Y5Q0 445 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCDH15Q96QU1 1955 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 MYLKQ15746 1914 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 A0A1B0GVT2 93 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 IGLON5A6NGN9 336 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 UPK3BL1B0FP48 263 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 UPK3BL2E5RIL1 263 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TRAFD1O14545 582 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 RAD51BO15315 384 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 BCAT2O15382 392 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 CEP104O60308 925 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TJP3O95049 919 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FGGP02679 453 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TIMP2P16035 220 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 KCNA4P22459 653 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TGM1P22735 817 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 CETN2P41208 172 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 COPS2P61201 443 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 KLF1Q13351 362 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 AASDHQ4L235 1098 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC45A4Q5BKX6 768 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 WDR45BQ5MNZ6 344 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 FAXCQ5TGI0 409 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 DARS2Q6PI48 645 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TSPAN33Q86UF1 283 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF567Q8N184 647 aa7.3□□□□□ -1.24
DEPDC1B-201ENST00000265036 TEX26Q8N6G2 289 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms