RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 A0A1W2PP55 124 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 C1QTNF3-AMACRE9PGA6 284 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 H7C0C1 242 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 PLK4O00444 970 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 MATN3O15232 486 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF217O75362 1048 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 LEFTY1O75610 366 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 RPP40O75818 363 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 IGLV3-19P01714 112 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 PRNPP04156 253 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 RBP3P10745 1247 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 ACADMP11310 421 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 SLC8A1P32418 973 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 CNR2P34972 360 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 DRD3P35462 400 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 ATP5OP48047 213 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 HNRNPDQ14103 355 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 PPP1R7Q15435 360 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 USP39Q53GS9 565 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 MARC1Q5VT66 337 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 DSG4Q86SJ6 1040 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 RYBPQ8N488 228 aaPredicted RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 CCDC89Q8N998 374 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 BBOF1Q8ND07 529 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 CCNYQ8ND76 341 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 TMIEQ8NEW7 156 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 NSMCE1Q8WV22 266 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
PFDN1-201ENST00000261813 ARRDC3Q96B67 414 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 GDAP1L1Q96MZ0 367 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 AMACRQ9UHK6 382 aa11.7□□□□□ -0.54
PFDN1-201ENST00000261813 FANCMQ8IYD8 2048 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 TTC24A2A3L6 582 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 BCLAF3A2AJT9 711 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 KCNK1O00180 336 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 POP4O95707 220 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 CR2P20023 1033 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 C5AR1P21730 350 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 MMP13P45452 471 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 CSNK1DP48730 415 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 DRG2P55039 364 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 MAXP61244 160 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 NSUN2Q08J23 767 aaKnown RBP eCLIP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 AP1B1Q10567 949 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 ZBTB17Q13105 803 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 SNX1Q13596 522 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF235Q14590 738 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 PRKD1Q15139 912 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 OASLQ15646 514 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 TTC31Q49AM3 519 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 SLC45A4Q5BKX6 768 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 FAM46CQ5VWP2 391 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 SRLQ86TD4 932 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 FAM124AQ86V42 546 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 ZC3H18Q86VM9 953 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 KIAA2013Q8IYS2 634 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 HDDC3Q8N4P3 179 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 FAM131CQ96AQ9 280 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 SPACA7Q96KW9 195 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 FAM118BQ9BPY3 351 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 MGME1Q9BQP7 344 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 LRRC1Q9BTT6 524 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 HAUS2Q9NVX0 235 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 WSB2Q9NYS7 404 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 DNPEPQ9ULA0 475 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 SCML1Q9UN30 329 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 R3HDM2Q9Y2K5 976 aaKnown RBP11.69□□□□□ -0.54
PFDN1-201ENST00000261813 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
PFDN1-201ENST00000261813 KPNA3O00505 521 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 RNASEH2AO75792 299 aaKnown RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 PIGNO95427 931 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 HLA-DQB2P05538 268 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 UGT2B4P06133 528 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CCNB1P14635 433 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CD6P30203 668 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 ACSL1P33121 698 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 HSPA9P38646 679 aaKnown RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 RENBPP51606 427 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 IFI35P80217 286 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CNTN1Q12860 1018 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 SIM2Q14190 667 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 PUM1Q14671 1186 aaKnown RBP eCLIP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 PLK5Q496M5 336 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 KBTBD6Q86V97 674 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CYP4X1Q8N118 509 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 BBS5Q8N3I7 341 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms