RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 UPK3BL1B0FP48 263 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 UPK3BL2E5RIL1 263 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 KHNYNO15037 678 aaKnown RBP18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 ZNF806P0C7X5 589 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 TAS2R38P59533 333 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 SPEM2Q0P670 501 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 TEAD4Q15561 434 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 CSRP2Q16527 193 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 ARMC12Q5T9G4 340 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 C12orf50Q8NA57 414 aaPredicted RBP18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 CXorf40AQ8TE69 158 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 NUSAP1Q9BXS6 441 aaKnown RBP18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 KLHL8Q9P2G9 620 aaPredicted RBP18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 EIF2B4Q9UI10 523 aaKnown RBP18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 PHTF1Q9UMS5 762 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 DMTF1Q9Y222 760 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 PCDHGC4Q9Y5F7 938 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 FAM186AA6NE01 2351 aa18.91■□□□□ 0.62
CYSTM1-201ENST00000261811 A0A1B0GTW7 788 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 A0A1W2PPC4 97 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 RNF103O00237 685 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 TIMP2P16035 220 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 PTPN3P26045 913 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 EPHB1P54762 984 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 DSC2Q02487 901 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 ZBTB17Q13105 803 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 SGCGQ13326 291 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 ITPRIPL1Q6GPH6 555 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 PID1Q7Z2X4 250 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 HORMAD1Q86X24 394 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 SLC13A5Q86YT5 568 aaPredicted RBP18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 ECHDC3Q96DC8 303 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 TEKT5Q96M29 485 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 C1QTNF7Q9BXJ2 289 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 TLR10Q9BXR5 811 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 SLC25A51Q9H1U9 297 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 SEMA4GQ9NTN9 838 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 PCDHB9Q9Y5E1 797 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 RAI2Q9Y5P3 530 aa18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.624e-8■■■□□ 15.3
CYSTM1-201ENST00000261811 RIF1Q5UIP0 2472 aaKnown RBP18.9■□□□□ 0.62
CYSTM1-201ENST00000261811 A0A1W2PQU0 124 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 TTC24A2A3L6 582 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CFAP69A5D8W1 941 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 TRAFD1O14545 582 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 BCAT2O15382 392 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 HTRA2O43464 458 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 LATO43561 262 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CEP104O60308 925 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CPP00450 1065 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CFIP05156 583 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 IGHV4-34P06331 123 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 MAOBP27338 520 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 AFF3P51826 1226 aaKnown RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 KLF1Q13351 362 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 PEAR1Q5VY43 1037 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CCDC70Q6NSX1 233 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 ADAT2Q7Z6V5 191 aaKnown RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 SPOCK2Q92563 424 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 LRRC45Q96CN5 670 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 PBKQ96KB5 322 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 PPP1R2P1Q96PQ5 205 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 NAP1L3Q99457 506 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 HERPUD2Q9BSE4 406 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 ADGRE3Q9BY15 652 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 GLOD4Q9HC38 313 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 ZKSCAN5Q9Y2L8 839 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
CYSTM1-201ENST00000261811 ATXN2Q99700 1313 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 ENC1O14682 589 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 AREL1O15033 823 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 KCNN4O15554 427 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 SYPP08247 313 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 CYP2A6P11509 494 aaPredicted RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 RBL1P28749 1068 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 MAT2AP31153 395 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 CD86P42081 329 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 ABL2P42684 1182 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 RPL26P61254 145 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 RACK1P63244 317 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 FAM193AP78312 1265 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 SLC14A2Q15849 920 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 TRIM61Q5EBN2 209 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 PLA2G2CQ5R387 149 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 B4GALNT4Q76KP1 1039 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 ALYREFQ86V81 257 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 ZCCHC9Q8N567 271 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 CNTD1Q8N815 330 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 ARRDC2Q8TBH0 407 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 CEP41Q9BYV8 373 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 PCDH12Q9NPG4 1184 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 HOMER3Q9NSC5 361 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 DNPEPQ9ULA0 475 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 PYCARDQ9ULZ3 195 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 SLC6A14Q9UN76 642 aa18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 RPL26L1Q9UNX3 145 aaKnown RBP18.88■□□□□ 0.61
CYSTM1-201ENST00000261811 PRAMEF26H0Y7S4 382 aa18.87■□□□□ 0.61
CYSTM1-201ENST00000261811 RIOK3O14730 519 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms