RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 EVA1BQ9NVM1 165 aa5.7□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM216Q9P0N5 145 aa5.7□□□□□ -1.5
TOPBP1-201ENST00000260810 BTBD3Q9Y2F9 522 aa5.7□□□□□ -1.5
TOPBP1-201ENST00000260810 PIGNO95427 931 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CD72P21854 359 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 SLC45A4Q5BKX6 768 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CCDC181Q5TID7 509 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 AGBL4Q5VU57 503 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 PSKH2Q96QS6 385 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 LYSMD1Q96S90 227 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 IL17CQ9P0M4 197 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 RUVBL2Q9Y230 463 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CCDC66A2RUB6 948 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TTC34A8MYJ7 566 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TM4SF5O14894 197 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ANOS1P23352 680 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CTCFP49711 727 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ZC3HC1Q86WB0 502 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 C1orf112Q9NSG2 853 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 GIMAP2Q9UG22 337 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ZC3H7BQ9UGR2 993 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 PPM1HQ9ULR3 514 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CHKBQ9Y259 395 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 WDR37Q9Y2I8 494 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 WNT6Q9Y6F9 365 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 LEFTY2O00292 366 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TUBBP07437 444 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 LSSP48449 732 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 GZMMP51124 257 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 FOXL2P58012 376 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 RASA2Q15283 850 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ARMC12Q5T9G4 340 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 PPP1R2P3Q6NXS1 205 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 NCEH1Q6PIU2 408 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TDRPQ86YL5 185 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ARID3BQ8IVW6 561 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CCDC117Q8IWD4 279 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 OR6K2Q8NGY2 324 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 SLC44A1Q8WWI5 657 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 ING5Q8WYH8 240 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 COX14Q96I36 57 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 RBM15Q96T37 977 aaKnown RBP eCLIP5.69□□□□□ -1.58e-8■■□□□ 13.7
TOPBP1-201ENST00000260810 STMN4Q9H169 189 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 MTO1Q9Y2Z2 717 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 PLEKHM1Q9Y4G2 1056 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM184BQ9Y519 407 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 H0Y8X5 98 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TGFBR3LH3BV60 316 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 PRSS23O95084 383 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 DYNLT1P63172 113 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM259Q4ZIN3 620 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 IL17RCQ8NAC3 791 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 LPGAT1Q92604 370 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 CYYR1Q96J86 154 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TSNARE1Q96NA8 513 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 FNBP1Q96RU3 617 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 TMEM79Q9BSE2 394 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 MBNL1Q9NR56 388 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 SSX2IPQ9Y2D8 614 aa5.69□□□□□ -1.5
TOPBP1-201ENST00000260810 SHANK1Q9Y566 2161 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 PRAMEF10O60809 474 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 ALOX15P16050 662 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 MGAT5BQ3V5L5 792 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 HSD11B1LQ7Z5J1 315 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 RHOT2Q8IXI1 618 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 GPR161Q8N6U8 529 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 LINC01555Q8NAE3 123 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 TXNDC5Q8NBS9 432 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 IRGQQ8WZA9 623 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 ARRDC3Q96B67 414 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 SCARF2Q96GP6 870 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 MAELQ96JY0 434 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 MAN1C1Q9NR34 630 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 SLAMF8Q9P0V8 285 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 SCHIP1Q9P0W5 487 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 PCDHGC4Q9Y5F7 938 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 H0YCG3 227 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 H7C0S8 307 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 HSF2BPO75031 334 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 SETSIPP0DME0 302 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 RBP3P10745 1247 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 IL12RB1P42701 662 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 PDE6CP51160 858 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 BTKQ06187 659 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 STRN3Q13033 797 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 WHAMMP3Q1A5X7 153 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 FAM47CQ5HY64 1035 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 ZFYVE27Q5T4F4 411 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 RFWD2Q8NHY2 731 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 DPH5Q9H2P9 285 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 DMAP1Q9NPF5 467 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 TOR4AQ9NXH8 423 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 HYDINQ4G0P3 5121 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 CCL16O15467 120 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 BAIAP3O94812 1187 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 KRT5P13647 590 aa5.68□□□□□ -1.5
TOPBP1-201ENST00000260810 PPP1CAP62136 330 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms