RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TLE6Q9H808 572 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 SNX15Q9NRS6 342 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 NSMCE4AQ9NXX6 385 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 INTS6Q9UL03 887 aaKnown RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 ARL5AQ9Y689 179 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 PRLP01236 227 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 PDHA1P08559 390 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 ALADP13716 330 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 GMPRP36959 345 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 SLC1A2P43004 574 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 NRIP1P48552 1158 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 MPP1Q00013 466 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 PLEKHG6Q3KR16 790 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 PPM1JQ5JR12 505 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 GKAP1Q5VSY0 366 aaPredicted RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 ZNF470Q6ECI4 717 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 FAM47EQ6ZV65 393 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 ZC3HC1Q86WB0 502 aaKnown RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 ACMSDQ8TDX5 336 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 SEC16BQ96JE7 1060 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 NSRP1Q9H0G5 558 aaKnown RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 LINC00597Q9H2U6 94 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 CAB39LQ9H9S4 337 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.53■■□□□ 1.2
SIX3-201ENST00000260653 KIAA1522Q9P206 1035 aaPredicted RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 MRPS23Q9Y3D9 190 aaKnown RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 BUD23O43709 281 aaKnown RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 PAPSS2O95340 614 aaPredicted RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 AHSGP02765 367 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 TYK2P29597 1187 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 CRHR1P34998 444 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 ARSDP51689 593 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 THOC5Q13769 683 aaKnown RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 TMC5Q6UXY8 1006 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 ARID3BQ8IVW6 561 aaPredicted RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 ITFG1Q8TB96 612 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 SMG7Q92540 1137 aaKnown RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 ELAC2Q9BQ52 826 aaKnown RBP22.52■■□□□ 1.2
SIX3-201ENST00000260653 TM6SF2Q9BZW4 377 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 NKX2-4Q9H2Z4 354 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 PIDD1Q9HB75 910 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 RAI2Q9Y5P3 530 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 REV3LO60673 3130 aa22.52■■□□□ 1.2
SIX3-201ENST00000260653 EBAG9O00559 213 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 SMAD6O43541 496 aaKnown RBP22.52■■□□□ 1.19
SIX3-201ENST00000260653 CES1P23141 567 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 LRRC8CQ8TDW0 803 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 RMDN1Q96DB5 314 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 SMIM14Q96QK8 99 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 ABCB8Q9NUT2 735 aa22.52■■□□□ 1.19
SIX3-201ENST00000260653 NEDD8-MDP1E9PL57 170 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 TIMM44O43615 452 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 HLA-FP30511 346 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 TRAF2Q12933 501 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 PTPRCAPQ14761 206 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 DLG2Q15700 870 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 RETSATQ6NUM9 610 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 NEPROQ6NW34 567 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 RGS9BPQ6ZS82 235 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 ISL2Q96A47 359 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 ACDQ96AP0 544 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 RHOJQ9H4E5 214 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 SLCO1B3Q9NPD5 702 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 SIN3BO75182 1162 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 MAGEA12P43365 314 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 SERPINB8P50452 374 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 NSUN2Q08J23 767 aaKnown RBP eCLIP22.51■■□□□ 1.19
SIX3-201ENST00000260653 USP4Q13107 963 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 GRM3Q14832 879 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 NCEH1Q6PIU2 408 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 PIGWQ7Z7B1 504 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 ARMC2Q8NEN0 867 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 PDCD6IPQ8WUM4 868 aaKnown RBP22.51■■□□□ 1.19
SIX3-201ENST00000260653 ZNF75CPQ92670 426 aaPredicted RBP22.51■■□□□ 1.19
SIX3-201ENST00000260653 LMLNQ96KR4 655 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 VPS11Q9H270 941 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 ARIH1Q9Y4X5 557 aaPredicted RBP22.51■■□□□ 1.19
SIX3-201ENST00000260653 SPO11Q9Y5K1 396 aa22.51■■□□□ 1.19
SIX3-201ENST00000260653 SOBPA7XYQ1 873 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 ZNF197O14709 1029 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 POU2F2P09086 479 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 SERPINB4P48594 390 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 PPP2R2DQ66LE6 453 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 NLRP9Q7RTR0 991 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 LPCAT1Q8NF37 534 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 VN1R2Q8NFZ6 395 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 BRSK1Q8TDC3 778 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 FAM167BQ9BTA0 163 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 WNT6Q9Y6F9 365 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 EPOPA6NHQ4 379 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 PENKP01210 267 aaPredicted RBP22.5■■□□□ 1.19
SIX3-201ENST00000260653 DUSP6Q16828 381 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 ASTLQ6HA08 431 aaPredicted RBP22.5■■□□□ 1.19
SIX3-201ENST00000260653 CACNA2D3Q8IZS8 1091 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 PNPLA1Q8N8W4 532 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 C2CD4AQ8NCU7 369 aaPredicted RBP22.5■■□□□ 1.19
SIX3-201ENST00000260653 OR6K2Q8NGY2 324 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 HDAC10Q969S8 669 aa22.5■■□□□ 1.19
SIX3-201ENST00000260653 DNAJC1Q96KC8 554 aaKnown RBP22.5■■□□□ 1.19
SIX3-201ENST00000260653 GPR22Q99680 433 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms