RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZRANB2O95218 330 aaKnown RBP eCLIP24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 CES1P23141 567 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 KIF5AQ12840 1032 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 SUZ12Q15022 739 aaKnown RBP24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 TMEM52BQ4KMG9 183 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 RCOR2Q8IZ40 523 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 OXR1Q8N573 874 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 PAF1Q8N7H5 531 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 DENND6BQ8NEG7 585 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 OR2I1PQ8NGU4 316 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 ECHDC3Q96DC8 303 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 RBM41Q96IZ5 413 aaKnown RBP24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 LENG8Q96PV6 779 aaPredicted RBP24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 C1QTNF2Q9BXJ5 285 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 TM7SF3Q9NS93 570 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 ASCC3Q8N3C0 2202 aaKnown RBP24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 WNT9AO14904 365 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 SOCS5O75159 536 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 NEBLO76041 1014 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 PRLRP16471 622 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 NFKBIAP25963 317 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 CDKN2BP42772 138 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 NXPH1P58417 271 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 SLC10A2Q12908 348 aaPredicted RBP24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 TAZQ16635 292 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 LAYNQ6UX15 382 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 MFSD7Q6UXD7 560 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 CCDC13Q8IYE1 715 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 PGBD5Q8N414 524 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 CCNYQ8ND76 341 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 KIAA1524Q8TCG1 905 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 SPOCK2Q92563 424 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 KLK6Q92876 244 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 KLHDC7BQ96G42 594 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 C1QTNF7Q9BXJ2 289 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 POLR1EQ9GZS1 481 aaKnown RBP24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 LACRTQ9GZZ8 138 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 BRD8Q9H0E9 1235 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 GOLPH3Q9H4A6 298 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 ERVMER34-1Q9H9K5 563 aa24.56■■□□□ 1.52
SDF2L1-201ENST00000248958 TRAFD1O14545 582 aaPredicted RBP24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 PPP1R12AO14974 1030 aaPredicted RBP24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 YKT6O15498 198 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 SPINT1O43278 529 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 TM7SF2O76062 418 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 KCNK5O95279 499 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 MAP3K6O95382 1288 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 PAK4O96013 591 aaPredicted RBP24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CEACAM1P13688 526 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CD59P13987 128 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CCNB1P14635 433 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CCT8P50990 548 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 PPIDQ08752 370 aaKnown RBP24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 PDK1Q15118 436 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 TFDP3Q5H9I0 405 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 PPM1JQ5JR12 505 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 SPOCD1Q6ZMY3 1216 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CCDC112Q8NEF3 446 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 EXD1Q8NHP7 514 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 ELF4Q99607 663 aaPredicted RBP24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 NT5MQ9NPB1 228 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 ITM2BQ9Y287 266 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 ATP8A1Q9Y2Q0 1164 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 HEY1Q9Y5J3 304 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 DUSP10Q9Y6W6 482 aa24.55■■□□□ 1.52
SDF2L1-201ENST00000248958 CFAP69A5D8W1 941 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 IGLON5A6NGN9 336 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 RIOK3O14730 519 aaKnown RBP24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 HTRA2O43464 458 aaPredicted RBP24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 NR2C2P49116 596 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 MAXP61244 160 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 ALG1LQ6GMV1 187 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 ABI3BPQ7Z7G0 1075 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 PIP4P1Q86T03 277 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 DCP2Q8IU60 420 aaKnown RBP24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 IL21RQ9HBE5 538 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 PCDH12Q9NPG4 1184 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 RBM22Q9NW64 420 aaKnown RBP eCLIP24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 GGT7Q9UJ14 662 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 FNDC3AQ9Y2H6 1198 aaKnown RBP24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 PCDHA3Q9Y5H8 950 aa24.54■■□□□ 1.52
SDF2L1-201ENST00000248958 A0A1B0GTQ1 180 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 CCDC66A2RUB6 948 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 A6NNZ2 444 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 H0Y8X5 98 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 PCDHGA12O60330 932 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 TGM2P21980 687 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 CTNNA1P35221 906 aaKnown RBP24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 NOVA1P51513 510 aaKnown RBP24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 COPS2P61201 443 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 ITKQ08881 620 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 FGL2Q14314 439 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 DBX2Q6ZNG2 339 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 SYCE1Q8N0S2 351 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 NOD2Q9HC29 1040 aa24.53■■□□□ 1.52
SDF2L1-201ENST00000248958 FPGTO14772 594 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 FLRT2O43155 660 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 ARHGAP6O43182 974 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 THEGLP0DJG4 465 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 CTNNA2P26232 953 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms