RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HNRNPDQ14103 355 aaKnown RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 UGP2Q16851 508 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 LGI2Q8N0V4 545 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 UMODL1-AS1Q8N2C9 162 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 PHF21BQ96EK2 531 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 IMP4Q96G21 291 aaKnown RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 BTN2A3PQ96KV6 586 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TLR8Q9NR97 1041 aaKnown RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM161AQ9NX61 479 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 MARCH4Q9P2E8 410 aaPredicted RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 KLHL2O95198 593 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 MMP2P08253 660 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 CPOXP36551 454 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 FAM189BP81408 668 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 FRG1Q14331 258 aaKnown RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TCHHL1Q5QJ38 904 aaPredicted RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 EPGNQ6UW88 154 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 PIM3Q86V86 326 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 DEFB107AQ8IZN7 70 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 SMIM14Q96QK8 99 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 NMRK1Q9NWW6 199 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 NSMCE4AQ9NXX6 385 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 ARL5AQ9Y689 179 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 CCL23P55773 120 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 PRAMEP78395 509 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 ROR2Q01974 943 aaKnown RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 SIRPB2Q5JXA9 342 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 NADSYN1Q6IA69 706 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 MSANTD2Q6P1R3 559 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 RYBPQ8N488 228 aaPredicted RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 TXNDC5Q8NBS9 432 aaKnown RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 OR7D4Q8NG98 312 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 BCL7CQ8WUZ0 217 aaPredicted RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 C1orf74Q96LT6 269 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 FAM210AQ96ND0 272 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 CATSPER2Q96P56 530 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 PPP1R12CQ9BZL4 782 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM248Q9NWD8 314 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 GTSE1Q9NYZ3 720 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 hCG_2014768A0A024R1R8 64 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 MT-CO1P00395 513 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 TFEBP19484 476 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 KCNA5P22460 613 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 GPNMBQ14956 572 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 TSTD2Q5T7W7 516 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 LHX8Q68G74 356 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 C2CD4AQ8NCU7 369 aaPredicted RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 OR13J1Q8NGT2 312 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 LENG8Q96PV6 779 aaPredicted RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 UBE2OQ9C0C9 1292 aaKnown RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 POMKQ9H5K3 350 aa15.88■□□□□ 0.13
LRFN1-201ENST00000248668 CHCHD3Q9NX63 227 aaKnown RBP15.88■□□□□ 0.13
LRFN1-201ENST00000248668 A0A088AWK7 358 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 AIM2O14862 343 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SYN3O14994 580 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 INPPL1O15357 1258 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 PQBP1O60828 265 aaKnown RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 PRSS56P0CW18 603 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 CDK18Q07002 472 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 LSM12Q3MHD2 195 aaKnown RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 DNAL1Q4LDG9 190 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SEL1L3Q68CR1 1132 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MFN1Q8IWA4 741 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 OR52K2Q8NGK3 314 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 PYDC1Q8WXC3 89 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 STOML1Q9UBI4 398 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 HEATR9A2RTY3 570 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 CCDC166P0CW27 439 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 IRF1P10914 325 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SELPP16109 830 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 GLDCP23378 1020 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 RPL14P50914 215 aaKnown RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 RPS24P62847 133 aaKnown RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 KIAA0930Q6ICG6 404 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM154Q6P9G4 183 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 DEFB128Q7Z7B8 93 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MYLK4Q86YV6 388 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 CNTN4Q8IWV2 1026 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TBATAQ96M53 351 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ZNF512Q96ME7 567 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 GPR78Q96P69 363 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SIKE1Q9BRV8 207 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MMADHCQ9H3L0 296 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 GPAMQ9HCL2 828 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 DLGAP2Q9P1A6 1054 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 THSD7BQ9C0I4 1608 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MOXD2PA6NHM9 499 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM189-UBE2V1I3L0A0 370 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MAGEC1O60732 1142 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 GJB5O95377 273 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 MSX2P35548 267 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 NDST2P52849 883 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 KLF10Q13118 480 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ZNF235Q14590 738 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TBCCQ15814 346 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 LRRC36Q1X8D7 754 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms