RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ACAT2Q9BWD1 397 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SAMHD1Q9Y3Z3 626 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 MEGF6O75095 1541 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 JCADQ9P266 1359 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 B4GALT5O43286 388 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SERPINH1P50454 418 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 DEFB128Q7Z7B8 93 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SYT15Q9BQS2 421 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC25A13Q9UJS0 675 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ST14Q9Y5Y6 855 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 STATHP02808 62 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MYL12AP19105 171 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC6A3Q01959 620 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SCRN3Q0VDG4 424 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 BST2Q10589 180 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 STX4Q12846 297 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 FRG1Q14331 258 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC9B1Q4ZJI4 515 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 LACTB2Q53H82 288 aaPredicted RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 C12orf56Q8IXR9 622 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 AMBNQ9NP70 447 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 hCG_1818297A0A087WSY0 165 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TMEM233B4DJY2 109 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 H3BSA7 217 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SGTAO43765 313 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TRIM3O75382 744 aaPredicted RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 RBP1P09455 135 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 NOTUMQ6P988 496 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CYP4Z1Q86W10 505 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 KRT78Q8N1N4 520 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 OR8H1Q8NGG4 311 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PROX1Q92786 737 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ESAMQ96AP7 390 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PRR11Q96HE9 360 aaPredicted RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 TECPR2O15040 1411 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 FAM172BPA6NC97 362 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TPTEP56180 551 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MACC1Q6ZN28 852 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 KIAA0408Q6ZU52 694 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 IQCKQ8N0W5 287 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC34A3Q8N130 599 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TMEM132CQ8N3T6 1108 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 FAM45AQ8TCE6 357 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 MIEF1Q9NQG6 463 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CATSPERZQ9NTU4 200 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 TBX1O43435 398 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 FCGR1AP12314 374 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PAOXQ6QHF9 649 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RASSF6Q6ZTQ3 369 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC25A23Q9BV35 468 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MTFR1LQ9H019 292 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MTF2Q9Y483 593 aaPredicted RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 CCR4P51679 360 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 NOMO3P69849 1222 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 NOMO1Q15155 1222 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 STILQ15468 1287 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 ACSBG2Q5FVE4 666 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 NOMO2Q5JPE7 1267 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 POMZP3Q6PJE2 187 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 WDR49Q8IV35 697 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 OR8H3Q8N146 312 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 MCOLN3Q8TDD5 553 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 CENPIQ92674 756 aaPredicted RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 GOLGA2P5Q9HBQ8 144 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 VTI1BQ9UEU0 232 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 GIMAP2Q9UG22 337 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 FAM220BPB1ANY3 271 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 CD4P01730 458 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 NUP62P37198 522 aaPredicted RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 RAB27AP51159 221 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 AP2S1P53680 142 aaPredicted RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 BEX3Q00994 111 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 UBAP2Q5T6F2 1119 aaKnown RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 HGSNATQ68CP4 663 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 PTCHD4Q6ZW05 846 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 EIF3MQ7L2H7 374 aaKnown RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 MPP5Q8N3R9 675 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 DIABLOQ9NR28 239 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 CTPS2Q9NRF8 586 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
RIF1-201ENST00000243326 DIP2AQ14689 1571 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 SNX4O95219 450 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
RIF1-201ENST00000243326 PDHA2P29803 388 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 CA9Q16790 459 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 SPDYCQ5MJ68 293 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 MOXD1Q6UVY6 613 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 PHACTR4Q8IZ21 702 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 TMEM130Q8N3G9 435 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 BEX2Q9BXY8 128 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 PNPLA3Q9NST1 481 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 CDH9Q9ULB4 789 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 G3V2T6 193 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 HLA-DQA2P01906 255 aa7.56□□□□□ -1.2
RIF1-201ENST00000243326 EPORP19235 508 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms