RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF852Q6ZMS4 543 aa13.84□□□□□ -0.19
SIX4-201ENST00000216513 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
SIX4-201ENST00000216513 NMUR1Q9HB89 426 aa13.84□□□□□ -0.19
SIX4-201ENST00000216513 PCDH9Q9HC56 1237 aa13.84□□□□□ -0.19
SIX4-201ENST00000216513 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
SIX4-201ENST00000216513 GMFGO60234 142 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 COX7A2P14406 83 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 IL10P22301 178 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 TTPAP49638 278 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 LCLAT1Q6UWP7 414 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 MCCC1Q96RQ3 725 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 ISCUQ9H1K1 167 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 PCDHA11Q9Y5I1 949 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 TRPC5OSA6NMA1 111 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 CHUKO15111 745 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 CES1P23141 567 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 IRAK1P51617 712 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 FAM46DQ8NEK8 389 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 FUBP3Q96I24 572 aaKnown RBP eCLIP13.83□□□□□ -0.2
SIX4-201ENST00000216513 ACE2Q9BYF1 805 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 NMRAL1Q9HBL8 299 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 AVENQ9NQS1 362 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 GLYATL1P3A0A0U1RQE8 302 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 NR5A2O00482 541 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 HLA-EP13747 358 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 MAGEA10P43363 369 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 RPL7AP62424 266 aaKnown RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 PTPRNQ16849 979 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 CFAP206Q8IYR0 622 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 CARS2Q9HA77 564 aaKnown RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 POLR1DQ9Y2S0 133 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 TYRP14679 529 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 SKIV2L2P42285 1042 aaKnown RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 FUT2Q10981 343 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 ZNF776Q68DI1 518 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 NEPROQ6NW34 567 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 PMF1Q6P1K2 205 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 ZSCAN1Q8NBB4 408 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 RBBP8Q99708 897 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 ILKAPQ9H0C8 392 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 KRCC1Q9NPI7 259 aaPredicted RBP13.83□□□□□ -0.2
SIX4-201ENST00000216513 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 ANKRD26Q9UPS8 1709 aa13.83□□□□□ -0.2
SIX4-201ENST00000216513 PPP2R1BP30154 601 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 NTSP30990 170 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ZBTB17Q13105 803 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PCID2Q5JVF3 399 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 CMTM8Q8IZV2 173 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 LCN9Q8WX39 176 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PCDHGC4Q9Y5F7 938 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PCDHA3Q9Y5H8 950 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 APOC4-APOC2K7ER74 178 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 APOC2P02655 101 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 GSTM1P09488 218 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ELK3P41970 407 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 RPS7P62081 194 aaKnown RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 LRRC49Q8IUZ0 686 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 JOSD2Q8TAC2 188 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 SLC4A5Q9BY07 1137 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 FGFBP2Q9BYJ0 223 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ARMCX1Q9P291 453 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ABI3Q9P2A4 366 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 AGMOQ6ZNB7 445 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 TTC29Q8NA56 475 aaPredicted RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 HMCESQ96FZ2 354 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 NDNQ99608 321 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 EXOSC4Q9NPD3 245 aaKnown RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 A0A0A0MRY4 1105 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 HEPACAM2A8MVW5 462 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 RFXAPO00287 272 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 LEFTY2O00292 366 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 UMPSP11172 480 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ACTR1BP42025 376 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PTPN9P43378 593 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 RANBP1P43487 201 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ACTR1AP61163 376 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 NFATC2Q13469 925 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PON2Q15165 354 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 LRRC23Q53EV4 343 aaPredicted RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 POU5F2Q8N7G0 328 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 METTL6Q8TCB7 284 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ZNF398Q8TD17 642 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 SPATA13Q96N96 652 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 TPSD1Q9BZJ3 242 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 PRDM16Q9HAZ2 1276 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 GID8Q9NWU2 228 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 TMEM114B3SHH9 223 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 EPHB6O15197 1021 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 TNFP01375 233 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms