RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Yme1l1O88967 715 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Smpdl3bP58242 456 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Eif2ak2Q03963 515 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rnf113a2Q14B01 337 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 FdxrQ61578 494 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rnf128Q9D304 428 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Phf10Q9D8M7 497 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Arap3Q8R5G7 1538 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm8871F7AXK2 190 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Grip2G3XA20 1042 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Khdc4Q3TCX3 612 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nemp1Q6ZQE4 437 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ythdf3Q8BYK6 585 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tor1aip2Q8BYU6 502 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Impg1Q8R1W8 798 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 AclyQ91V92 1091 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lztr1Q9CQ33 837 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tmem86aQ9D8N3 241 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dcpp3L7N259 170 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Hcn4O70507 1186 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lcp2Q60787 533 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pcdh20Q8BIZ0 952 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Stk32cQ8QZV4 488 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gimap3Q99MI6 301 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gtf3c6Q9D8P7 227 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Atp6ap1Q9R1Q9 463 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Trip6Q9Z1Y4 480 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 CluhQ5SW19 1315 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zcchc11B2RX14 1644 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sult3a1O35403 293 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Aak1Q3UHJ0 959 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Klra3Q64329 266 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pcid2Q8BFV2 399 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 PrkxQ922R0 355 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vmn2r63E9Q0K5 859 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm9268E9Q0M3 861 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vmn2r62K7N712 859 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mcpt4P21812 246 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Prim2P33610 505 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 LeprP48356 1162 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 McubQ810S1 345 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cgrrf1Q8BMJ7 332 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mcoln2Q8K595 566 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gmcl1Q920G9 524 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cdc40Q9DC48 579 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm7086A0A1W2P766 342 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mapk12O08911 367 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Anxa3O35639 323 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Capn6O35646 641 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 GcatO88986 416 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rfx2P48379 717 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm12258Q5NC63 627 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Hectd2Q8CDU6 774 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 ToporslQ9D2F8 683 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr703Q9EPF5 319 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Eif2s3xQ9Z0N1 472 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Eif2s3yQ9Z0N2 472 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Znf804aA2AKY4 1200 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Apold1E9Q0X2 246 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm17555F6U8B9 371 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nkx1-1G3UXB3 402 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Psme3P61290 254 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cntn3Q07409 1028 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm813Q3UWK9 176 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pik3c3Q6PF93 887 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pnpla8Q8K1N1 776 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 FlcnQ8QZS3 579 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Oxnad1Q8VE38 311 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Decr1Q9CQ62 335 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dcdc2cQ9D1B8 347 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Trpm5Q9JJH7 1158 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 HunkO88866 714 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 TankP70347 448 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lcn3Q62471 182 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Parp6Q6P6P7 630 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr23Q7TRX4 325 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Qsox1Q8BND5 748 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 B3gnt7Q8K0J2 397 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pcdhga9Q91XX9 932 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Arl4dQ99PE9 201 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 HaghlQ9DB32 283 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Edf1Q9JMG1 148 aaKnown RBP12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Slco1a1Q9QXZ6 670 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fam166bA2AIP0 273 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ifi203O35368 408 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Hsf2P38533 535 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Arhgef19Q8BWA8 802 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Clic5Q8BXK9 251 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zdhhc3Q8R173 299 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Elovl6Q920L5 267 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Izumo2Q9DA16 220 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyp2g1Q9WV19 494 aa12.01□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fgf10O35565 209 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Suv39h1O54864 412 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Naf1Q3UMQ8 489 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Clhc1Q5M6W3 596 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 EnkurQ6SP97 255 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vac14Q80WQ2 782 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 RptorQ8K4Q0 1335 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 MipepA6H611 711 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms