RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TPH1P17752 444 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 SDHBP21912 280 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 GCAP28676 217 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 CD70P32970 193 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 VIPR2P41587 438 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 IHHQ14623 411 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 EFTUD2Q15029 972 aaKnown RBP eCLIP13.26□□□□□ -0.294e-6■■■■□ 21.9
PHGDH-221ENST00000641573 PCSK7Q16549 785 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 RSPO4Q2I0M5 234 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-221ENST00000641573 FAM78AQ5JUQ0 283 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 CERCAMQ5T4B2 595 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 ALG1LQ6GMV1 187 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 LINGO4Q6UY18 593 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 GET4Q7L5D6 327 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-221ENST00000641573 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 FGF13Q92913 245 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 RSPRY1Q96DX4 576 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 LMLNQ96KR4 655 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 LRRC3BQ96PB8 259 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 CYTH2Q99418 400 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 MGME1Q9BQP7 344 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 TRIM56Q9BRZ2 755 aaKnown RBP13.26□□□□□ -0.29
PHGDH-221ENST00000641573 C2orf49Q9BVC5 232 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-221ENST00000641573 BBS2Q9BXC9 721 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 FSD1LQ9BXM9 530 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 STMN4Q9H169 189 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-221ENST00000641573 PPCSQ9HAB8 311 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 SPHK2Q9NRA0 654 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 SAMD15Q9P1V8 674 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 LGALS13Q9UHV8 139 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 SLC24A2Q9UI40 661 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 VPS51Q9UID3 782 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 CHD5Q8TDI0 1954 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 NEDD8-MDP1E9PL57 170 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 ATP9BO43861 1147 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 CDH16O75309 829 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 GJB3O75712 270 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 TMCC1O94876 653 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 RGRP47804 291 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 PLK1P53350 603 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 GEMIN4P57678 1058 aaKnown RBP13.25□□□□□ -0.29
PHGDH-221ENST00000641573 SLC12A1Q13621 1099 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 INO80DQ53TQ3 878 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-221ENST00000641573 SPANXN3Q5MJ09 141 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 LY6G5CQ5SRR4 150 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 RETSATQ6NUM9 610 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 KDELC2Q7Z4H8 507 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 TDRPQ86YL5 185 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 ADGRG2Q8IZP9 1017 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 RIBC1Q8N443 379 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-221ENST00000641573 FAM76AQ8TAV0 307 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 SMARCD2Q92925 531 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 MRRFQ96E11 262 aaKnown RBP13.25□□□□□ -0.29
PHGDH-221ENST00000641573 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 IL22Q9GZX6 179 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 DUS2Q9NX74 493 aaKnown RBP13.25□□□□□ -0.29
PHGDH-221ENST00000641573 GDE1Q9NZC3 331 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 FETUBQ9UGM5 382 aa13.25□□□□□ -0.29
PHGDH-221ENST00000641573 C2orf16Q68DN1 1984 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 MAGEB16A2A368 324 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
PHGDH-221ENST00000641573 C1QAP02745 245 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 POLBP06746 335 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 SERPINF2P08697 491 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 TYRP14679 529 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 CR2P20023 1033 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 CES1P23141 567 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 PRKCHP24723 683 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 MSH2P43246 934 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 CHRNA4P43681 627 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 GYS2P54840 703 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 MAGOHP61326 146 aaKnown RBP13.24□□□□□ -0.29
PHGDH-221ENST00000641573 CRYMQ14894 314 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 TMED2Q15363 201 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 SLC14A2Q15849 920 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 PLEKHG6Q3KR16 790 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 KBTBD12Q3ZCT8 623 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 TNFAIP8L3Q5GJ75 292 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 PITRM1Q5JRX3 1037 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 SLC25A41Q8N5S1 370 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 BPIFB1Q8TDL5 484 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 ACDQ96AP0 544 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 EXOC2Q96KP1 924 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 DHRS4Q9BTZ2 278 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 KCNK12Q9HB15 430 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 ABCB8Q9NUT2 735 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 EURLQ9NYK6 297 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms