RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SCG3Q8WXD2 468 aaKnown RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 EXTL1Q92935 676 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 TSACCQ96A04 125 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 ARHGEF26Q96DR7 871 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 PGAP3Q96FM1 320 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 EPAS1Q99814 870 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 STRADBQ9C0K7 418 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 MBNL1Q9NR56 388 aaKnown RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 RABGEF1Q9UJ41 708 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 ATXN7L1Q9ULK2 861 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 HPCAL4Q9UM19 191 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 COQ6Q9Y2Z9 468 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 D6RAR5 112 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 RIOK3O14730 519 aaKnown RBP15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ETFBP38117 255 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 INHBCP55103 352 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 CCL7P80098 99 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 IRF4Q15306 451 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ELOCQ15369 112 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ARL13BQ3SXY8 428 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 TRNP1Q6NT89 227 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 PHLDB2Q86SQ0 1253 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 EMC1Q8N766 993 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ARL10Q8N8L6 244 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 Q8N9G6 341 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-228ENST00000639659 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.03
SYNE2-228ENST00000639659 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 CENPTQ96BT3 561 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 HAPLN3Q96S86 360 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 METTL5Q9NRN9 209 aaKnown RBP15.21■□□□□ 0.03
SYNE2-228ENST00000639659 NDFIP2Q9NV92 336 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF212Q9UDV6 495 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 GPR34Q9UPC5 381 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
SYNE2-228ENST00000639659 PES1O00541 588 aaKnown RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 CD160O95971 181 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 GSRP00390 522 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 MLLT3P42568 568 aaPredicted RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 GEMIN4P57678 1058 aaKnown RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 YPEL5P62699 121 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 MYLK3Q32MK0 819 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 RAB6CQ53S08 254 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 ACBD5Q5T8D3 534 aaPredicted RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 ENPP7Q6UWV6 458 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 GDPD4Q6W3E5 623 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 VASH2Q86V25 355 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 MSANTD4Q8NCY6 345 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 ASB12Q8WXK4 309 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 SGF29Q96ES7 293 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 LIN37Q96GY3 246 aaPredicted RBP15.2■□□□□ 0.02
SYNE2-228ENST00000639659 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 RAB6CQ9H0N0 254 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 LOXL2Q9Y4K0 774 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
SYNE2-228ENST00000639659 NTN3O00634 580 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 EFSO43281 561 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 BUB1O43683 1085 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 RAMP2O60895 175 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 TMCC1O94876 653 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 RASGRP1O95267 797 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 POP4O95707 220 aaKnown RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 IGSF6O95976 241 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 ALPIP09923 528 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 FAM87AP0C7U9 286 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 ITIH1P19827 911 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 CSRP3P50461 194 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 BLKP51451 505 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 MAPK10P53779 464 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 BPIFB4P59827 614 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 C15orf59Q2T9L4 293 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 LINC00303Q3SY05 128 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 MANEAQ5SRI9 462 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 NAA35Q5VZE5 725 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 GKN2Q86XP6 184 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 FSTL5Q8N475 847 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 TP53I13Q8NBR0 393 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-228ENST00000639659 CPA5Q8WXQ8 436 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 GDAP1L1Q96MZ0 367 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 OR12D3Q9UGF7 316 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 RWDD2AQ9UIY3 292 aa15.19■□□□□ 0.02
SYNE2-228ENST00000639659 AREL1O15033 823 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 PCCBP05166 539 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 CYP11B1P15538 503 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 HTR1BP28222 390 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 SCNN1AP37088 669 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 GABRB2P47870 512 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 MAPKAPK2P49137 400 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 HK3P52790 923 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 RHOAP61586 193 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 RAD51Q06609 339 aa15.18■□□□□ 0.02
SYNE2-228ENST00000639659 EIF3IQ13347 325 aaKnown RBP15.18■□□□□ 0.02
SYNE2-228ENST00000639659 ALG11Q2TAA5 492 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms