RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TRIM69Q86WT6 500 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 KIAA1524Q8TCG1 905 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 HERPUD2Q9BSE4 406 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 MAK16Q9BXY0 300 aaKnown RBP22.02■■□□□ 1.12
SCN1B-206ENST00000638536 SUV39H2Q9H5I1 410 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 CA5BQ9Y2D0 317 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 PCNX2A6NKB5 2137 aa22.02■■□□□ 1.12
SCN1B-206ENST00000638536 A0A1B0GVT2 93 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 C4orf47A7E2U8 309 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 PRR5-ARHGAP8B1AHC4 643 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 PRLRP16471 622 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 CTNNA1P35221 906 aaKnown RBP22.02■■□□□ 1.11
SCN1B-206ENST00000638536 ARHGAP8P85298 464 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 GRIK2Q13002 908 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 FGL2Q14314 439 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 ZNF235Q14590 738 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 IHHQ14623 411 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 IFI16Q16666 785 aaKnown RBP22.02■■□□□ 1.11
SCN1B-206ENST00000638536 MARC1Q5VT66 337 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 TTC7BQ86TV6 843 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 TEX26Q8N6G2 289 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.02■■□□□ 1.11
SCN1B-206ENST00000638536 MAML1Q92585 1016 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 TSGA13Q96PP4 275 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 GTPBP2Q9BX10 602 aaKnown RBP22.02■■□□□ 1.11
SCN1B-206ENST00000638536 PCDHA3Q9Y5H8 950 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 CAPN6Q9Y6Q1 641 aa22.02■■□□□ 1.11
SCN1B-206ENST00000638536 ARHGAP33O14559 1287 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 MATN3O15232 486 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 ARHGAP6O43182 974 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 FOXD2O60548 495 aaPredicted RBP22.01■■□□□ 1.11
SCN1B-206ENST00000638536 ZRANB2O95218 330 aaKnown RBP eCLIP22.01■■□□□ 1.11
SCN1B-206ENST00000638536 PRKCGP05129 697 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 CCNCP24863 283 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 MMP13P45452 471 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 PEX5P50542 639 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 SEMG2Q02383 582 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 ZNF284Q2VY69 593 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 ODF2Q5BJF6 829 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 AADACL2Q6P093 401 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 NT5DC3Q86UY8 548 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 HORMAD1Q86X24 394 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 LRRC49Q8IUZ0 686 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 CCNYQ8ND76 341 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 NETO1Q8TDF5 533 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 ALG3Q92685 438 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 MYOCQ99972 504 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 MGME1Q9BQP7 344 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 NOD2Q9HC29 1040 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 NT5MQ9NPB1 228 aa22.01■■□□□ 1.11
SCN1B-206ENST00000638536 PACSIN2Q9UNF0 486 aaPredicted RBP22.01■■□□□ 1.11
SCN1B-206ENST00000638536 hCG_1818297A0A087WSY0 165 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 TRAFD1O14545 582 aaPredicted RBP22■■□□□ 1.11
SCN1B-206ENST00000638536 AREL1O15033 823 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 SLC31A1O15431 190 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 CST8O60676 142 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 PECAM1P16284 738 aaPredicted RBP22■■□□□ 1.11
SCN1B-206ENST00000638536 AFF3P51826 1226 aaKnown RBP22■■□□□ 1.11
SCN1B-206ENST00000638536 CCDC15Q0P6D6 951 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 TMEM259Q4ZIN3 620 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 RABEPKQ7Z6M1 372 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22■■□□□ 1.11
SCN1B-206ENST00000638536 HDAC11Q96DB2 347 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 SERAC1Q96JX3 654 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 OLFM3Q96PB7 478 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 FZD3Q9NPG1 666 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 DLL3Q9NYJ7 618 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 DKK3Q9UBP4 350 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 PCDHGC4Q9Y5F7 938 aa22■■□□□ 1.11
SCN1B-206ENST00000638536 TDRD6O60522 2096 aaKnown RBP21.99■■□□□ 1.11
SCN1B-206ENST00000638536 A0A1W2PR77 199 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 TSPAN11A1L157 253 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 KCNK3O14649 394 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 AP1G1O43747 822 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 FTCDO95954 541 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 CTNNA2P26232 953 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 RENBPP51606 427 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 RACK1P63244 317 aaKnown RBP21.99■■□□□ 1.11
SCN1B-206ENST00000638536 HNRNPDQ14103 355 aaKnown RBP21.99■■□□□ 1.11
SCN1B-206ENST00000638536 KIF19Q2TAC6 998 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 TFDP3Q5H9I0 405 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 NEK5Q6P3R8 708 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 PRPF39Q86UA1 669 aaKnown RBP21.99■■□□□ 1.11
SCN1B-206ENST00000638536 RCOR2Q8IZ40 523 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 EXD1Q8NHP7 514 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 NUDCD1Q96RS6 583 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 TUBGCP5Q96RT8 1024 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 HEMGNQ9BXL5 484 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 IL21RQ9HBE5 538 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 TMEM9BQ9NQ34 198 aa21.99■■□□□ 1.11
SCN1B-206ENST00000638536 CDV3Q9UKY7 258 aaKnown RBP21.99■■□□□ 1.11
SCN1B-206ENST00000638536 KCNK1O00180 336 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CCNB1P14635 433 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 MX2P20592 715 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 LIMK1P53667 647 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 PPIDQ08752 370 aaKnown RBP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CCDC50Q8IVM0 306 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CCDC13Q8IYE1 715 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 MINDY1Q8N5J2 469 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CCDC112Q8NEF3 446 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms