RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
CLN6-219ENST00000637329 RGRP47804 291 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 PCSK7Q16549 785 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 CERCAMQ5T4B2 595 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 MFSD6LQ8IWD5 586 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 CPA6Q8N4T0 437 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLN6-219ENST00000637329 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLN6-219ENST00000637329 CDKL2Q92772 493 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 PEX13Q92968 403 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 ASIC4Q96FT7 647 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 TRIB3Q96RU7 358 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 PAFAH2Q99487 392 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 APOL2Q9BQE5 337 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 FAM83CQ9BQN1 747 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 NOD2Q9HC29 1040 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 MOCS1Q9NZB8 636 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 CDH22Q9UJ99 828 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 ZNF180Q9UJW8 692 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 TCAF1Q9Y4C2 921 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 ACTL7AQ9Y615 435 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 MUC6Q6W4X9 2439 aa15.51■□□□□ 0.07
CLN6-219ENST00000637329 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 SOCS5O75159 536 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 ECI2O75521 394 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 IGSF6O95976 241 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 GSRP00390 522 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 SRCP12931 536 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 ALADP13716 330 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 ADRA1DP25100 572 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 GCAP28676 217 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 SLCO1A2P46721 670 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 DGKGP49619 791 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 SCNN1BP51168 640 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 CRADDP78560 199 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 KBTBD12Q3ZCT8 623 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 C22orf39Q6P5X5 142 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 NCEH1Q6PIU2 408 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 VITQ6UXI7 678 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 MTSS1LQ765P7 747 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 MARK2Q7KZI7 788 aaKnown RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 TAOK1Q7L7X3 1001 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 NLRP9Q7RTR0 991 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 LRRC6Q86X45 466 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 ETFBKMTQ8IXQ9 262 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 PCDH20Q8N6Y1 951 aaKnown RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 SLC44A1Q8WWI5 657 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 MYADMQ96S97 322 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 CENPHQ9H3R5 247 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 PIH1D1Q9NWS0 290 aaKnown RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 SENP1Q9P0U3 644 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 FCF1Q9Y324 198 aaKnown RBP15.5■□□□□ 0.07
CLN6-219ENST00000637329 ACTL7BQ9Y614 415 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 IKBKGQ9Y6K9 419 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 RPS6KL1Q9Y6S9 549 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 MIA3Q5JRA6 1907 aa15.5■□□□□ 0.07
CLN6-219ENST00000637329 TLDC2A0PJX2 215 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 PRR33A8MZF0 331 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ATP9BO43861 1147 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 PAPSS2O95340 614 aaPredicted RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 INHBAP08476 426 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 LAMP2P13473 410 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 PAMP19021 973 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 GBP2P32456 591 aaPredicted RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 LTBRP36941 435 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 EIF2DP41214 584 aaKnown RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 MSH2P43246 934 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 NUMBP49757 651 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 RPL26P61254 145 aaKnown RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 ECT2LQ008S8 904 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 DLX2Q07687 328 aaPredicted RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 IHHQ14623 411 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 GRM3Q14832 879 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 EIF4HQ15056 248 aaKnown RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 ANKRD20A4Q4UJ75 823 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 SIRPB2Q5JXA9 342 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 MBLAC2Q68D91 279 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 TANGO2Q6ICL3 276 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 PKN3Q6P5Z2 889 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ADGRD1Q6QNK2 874 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 SRLQ86TD4 932 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ADIPOR2Q86V24 386 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 SLC26A11Q86WA9 606 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 PLPP6Q8IY26 295 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 YAF2Q8IY57 180 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 SH2D3CQ8N5H7 860 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 OR2AP1Q8NGE2 309 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 FAM76AQ8TAV0 307 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ZNF669Q96BR6 464 aaPredicted RBP15.49■□□□□ 0.07
CLN6-219ENST00000637329 CERS2Q96G23 380 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 EXOC2Q96KP1 924 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 TUBGCP5Q96RT8 1024 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ADGRE3Q9BY15 652 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 ECT2Q9H8V3 914 aa15.49■□□□□ 0.07
CLN6-219ENST00000637329 NSMCE4AQ9NXX6 385 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms