RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 BOLA3Q53S33 107 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 ERAP2Q6P179 960 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 KANSL1Q7Z3B3 1105 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PARGQ86W56 976 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 ARFGAP1Q8N6T3 406 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PDCD7Q8N8D1 485 aaKnown RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 OR4C6Q8NH72 309 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 BMFQ96LC9 184 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 ZNF641Q96N77 438 aaPredicted RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 TUBGCP5Q96RT8 1024 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PEBP4Q96S96 227 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 CINPQ9BW66 212 aaPredicted RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 SLC39A8Q9C0K1 460 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 GGT7Q9UJ14 662 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 CAPN11Q9UMQ6 739 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 CABIN1Q9Y6J0 2220 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 KMT2BQ9UMN6 2715 aaPredicted RBP19.17■□□□□ 0.66
CLN6-213ENST00000636212 KNL1Q8NG31 2342 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 SPTY2D1-AS1A0A0U1RR47 76 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 POM121BA6NF01 834 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 TOR1BO14657 336 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 AREL1O15033 823 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 FFAR2O15552 330 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 SIGLEC6O43699 453 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 RFTN1Q14699 578 aaPredicted RBP19.17■□□□□ 0.66
CLN6-213ENST00000636212 BRAT1Q6PJG6 821 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 PROSER1Q86XN7 944 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 SLC22A18ASQ8N1D0 253 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 NETO2Q8NC67 525 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 BTN2A2Q8WVV5 523 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 TSC1Q92574 1164 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 DUSP23Q9BVJ7 150 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 TRIM7Q9C029 511 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 SUV39H2Q9H5I1 410 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 ATP13A3Q9H7F0 1226 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 PDFQ9HBH1 243 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 NLGN3Q9NZ94 848 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
CLN6-213ENST00000636212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.17■□□□□ 0.662e-8■■■□□ 18
CLN6-213ENST00000636212 PTPRBP23467 1997 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 FAM149AA5PLN7 773 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 RAD51BO15315 384 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 MMP20O60882 483 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 TIMP2P16035 220 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 ACP1P24666 158 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 SERPINA4P29622 427 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 PBX1P40424 430 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 CSNK1DP48730 415 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 DUSP3P51452 185 aaPredicted RBP19.16■□□□□ 0.66
CLN6-213ENST00000636212 RENBPP51606 427 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 IL10RBQ08334 325 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 LRRC73Q5JTD7 316 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 HGSNATQ68CP4 663 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 SLC25A45Q8N413 288 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 HSPH1Q92598 858 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 KLF6Q99612 283 aaPredicted RBP19.16■□□□□ 0.66
CLN6-213ENST00000636212 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
CLN6-213ENST00000636212 IFNKQ9P0W0 207 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 TRPM6Q9BX84 2022 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 DOCK9Q9BZ29 2069 aa19.16■□□□□ 0.66
CLN6-213ENST00000636212 TRABD2BA6NFA1 517 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 INSIG1O15503 277 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 PIGNO95427 931 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 CSF2P04141 144 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 YPEL5P62699 121 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 E2F1Q01094 437 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 BCL2L1Q07817 233 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 FZD2Q14332 565 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 UGP2Q16851 508 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 PROX2Q3B8N5 592 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 ZNF542PQ5EBM4 170 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 TMCO4Q5TGY1 634 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 TMCO3Q6UWJ1 677 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 SRLQ86TD4 932 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 BBS5Q8N3I7 341 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 NSMCE1Q8WV22 266 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 WRAP53Q9BUR4 548 aaKnown RBP19.15■□□□□ 0.66
CLN6-213ENST00000636212 THAP2Q9H0W7 228 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 GPR27Q9NS67 375 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 UCKL1Q9NWZ5 548 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 ANAPC7Q9UJX3 599 aa19.15■□□□□ 0.66
CLN6-213ENST00000636212 TRIM38O00635 465 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 SCAMP1O15126 338 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 CBFA2T2O43439 604 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 NME1P15531 152 aaKnown RBP19.14■□□□□ 0.65
CLN6-213ENST00000636212 SERPINB6P35237 376 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 SSR1P43307 286 aaKnown RBP19.14■□□□□ 0.65
CLN6-213ENST00000636212 PFN3P60673 137 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 POLR2LP62875 67 aaKnown RBP19.14■□□□□ 0.65
CLN6-213ENST00000636212 DPYSL2Q16555 572 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 HADHQ16836 314 aaKnown RBP19.14■□□□□ 0.65
CLN6-213ENST00000636212 SMTNL2Q2TAL5 461 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 TMEM52BQ4KMG9 183 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 CCDC122Q5T0U0 273 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 HES3Q5TGS1 186 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 AFMIDQ63HM1 303 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 ALKBH5Q6P6C2 394 aaKnown RBP19.14■□□□□ 0.65
CLN6-213ENST00000636212 MDM1Q8TC05 714 aa19.14■□□□□ 0.65
CLN6-213ENST00000636212 TEKT4Q8WW24 435 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms