RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TLR7Q9NYK1 1049 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FARSAQ9Y285 508 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MYRFQ9Y2G1 1151 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C2orf72A6NCS6 295 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SPTLC1O15269 473 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ZC3H11AO75152 810 aaKnown RBP eCLIP6.06□□□□□ -1.442e-6■□□□□ 9.4
SCN1A-212ENST00000636194 NMT1P30419 496 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ADSSP30520 456 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 THPOP40225 353 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CAPZA1P52907 286 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 BCAT1P54687 386 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TIGD4Q8IY51 512 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CXorf40AQ8TE69 158 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PNPLA2Q96AD5 504 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ACSF2Q96CM8 615 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PLGRKTQ9HBL7 147 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 NMRAL1Q9HBL8 299 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PHF24Q9UPV7 400 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ERVK-11Q9UQG0 969 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TPST1O60507 370 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 B3GAT3O94766 335 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PRLP01236 227 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CYP1A1P04798 512 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PCCAP05165 728 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 POLR2HP52434 150 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MSLNQ13421 630 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TUBA3CQ13748 450 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LRIG3Q6UXM1 1119 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SLFN11Q7Z7L1 901 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PRR22Q8IZ63 422 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 GPRC5AQ8NFJ5 357 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ITFG1Q8TB96 612 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C22orf15Q8WYQ4 148 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ELMO1Q92556 727 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 KCNJ9Q92806 393 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 EPB41L4AQ9HCS5 686 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TRMT13Q9NUP7 481 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DDIT4Q9NX09 232 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 GPRC5DQ9NZD1 345 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RNF181Q9P0P0 153 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TRPS1Q9UHF7 1281 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SLC24A2Q9UI40 661 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHGA5Q9Y5G8 931 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 IL12BP29460 328 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MRPL49Q13405 166 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 GOLGA7BQ2TAP0 167 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SLC9B1Q4ZJI4 515 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LCN1P1Q5VSP4 162 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SLC2A7Q6PXP3 512 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C1orf186Q6ZWK4 172 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PHYKPLQ8IUZ5 450 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C8orf58Q8NAV2 365 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LENG1Q96BZ8 264 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ERP27Q96DN0 273 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PRMT8Q9NR22 394 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ARL8BQ9NVJ2 186 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 HPF1Q9NWY4 346 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 VANGL2Q9ULK5 521 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 METP08581 1390 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 HEATR5BQ9P2D3 2071 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 A0A087WXM4 84 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CIB4A0PJX0 185 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SH3PXD2BA1X283 911 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RIIAD1A6NNX1 92 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SEC22BO75396 215 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LPLP06858 475 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 WEE2P0C1S8 567 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ITPKBP27987 946 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RAB27AP51159 221 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ALDH5A1P51649 535 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TUBA4AP68366 448 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 BNIP1Q12981 228 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 BOP1Q14137 746 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 XRRA1Q6P2D8 792 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 OLFML1Q6UWY5 402 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LIX1Q8N485 282 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C9orf43Q8TAL5 461 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DENND1AQ8TEH3 1009 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SNX33Q8WV41 574 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SMG7Q92540 1137 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 UBXN10Q96LJ8 280 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 STRA6Q9BX79 667 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DCLRE1BQ9H816 532 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DNAAF2Q9NVR5 837 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF226Q9NYT6 803 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 OPTCQ9UBM4 332 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ACAD8Q9UKU7 415 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RUVBL1Q9Y265 456 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 NDUFAF1Q9Y375 327 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ADAM18Q9Y3Q7 739 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 POLR3AO14802 1390 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 OR6C6A6NF89 314 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ZBTB7AO95365 584 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 ASLP04424 464 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 VIL1P09327 827 aaKnown RBP6.05□□□□□ -1.44
SCN1A-212ENST00000636194 GALK1P51570 392 aa6.05□□□□□ -1.44
SCN1A-212ENST00000636194 PITPNAQ00169 270 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms