RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RANBP9Q96S59 729 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 KLHL4Q9C0H6 718 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 YIPF3Q9GZM5 350 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 TRPV6Q9H1D0 765 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 UPF3AQ9H1J1 476 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 SLC25A51Q9H1U9 297 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ZNF385DQ9H6B1 395 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 WDR55Q9H6Y2 383 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 AGO3Q9H9G7 860 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 TREX1Q9NSU2 369 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SPATS2LQ9NUQ6 558 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 CLIC5Q9NZA1 410 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 XPR1Q9UBH6 696 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 STK39Q9UEW8 545 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 VPS28Q9UK41 221 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 FBXO5Q9UKT4 447 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 PADI3Q9ULW8 664 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 CHD5Q8TDI0 1954 aa8.15□□□□□ -1.11
GPC3-204ENST00000631057 KCNU1A8MYU2 1149 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 TNFRSF10BO14763 440 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 AIM2O14862 343 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CASQ2O14958 399 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 PEX1O43933 1283 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 MGEA5O60502 916 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ZMPSTE24O75844 475 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 LYNP07948 512 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CPB1P15086 417 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 RAG1P15918 1043 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ATP5F1P24539 256 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 ARNTP27540 789 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CD52P31358 61 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 GRIK1P39086 918 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 THPOP40225 353 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 PAPOLAP51003 745 aaKnown RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 CLCN5P51795 746 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 WNT3AP56704 352 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 IRX1P78414 480 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 NSUN2Q08J23 767 aaKnown RBP eCLIP8.14□□□□□ -1.11
GPC3-204ENST00000631057 CTBP1Q13363 440 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 PEX6Q13608 980 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ITGA7Q13683 1181 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 RFTN1Q14699 578 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 CNGA3Q16281 694 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 FAM83EQ2M2I3 478 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 PAN2Q504Q3 1202 aaKnown RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 TCHHL1Q5QJ38 904 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 SH2D4BQ5SQS7 431 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NXNQ6DKJ4 435 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 MSANTD2Q6P1R3 559 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ZFP1Q6P2D0 407 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 KLC3Q6P597 504 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 GALNT7Q86SF2 657 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 SDCCAG8Q86SQ7 713 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 KBTBD6Q86V97 674 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 LRRTM3Q86VH5 581 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NPAS4Q8IUM7 802 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CEP97Q8IW35 865 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 DSELQ8IZU8 1212 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 LSMEM2Q8N112 164 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ARHGAP18Q8N392 663 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CCNYL1Q8N7R7 359 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 TRPV1Q8NER1 839 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 SHKBP1Q8TBC3 707 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 GDPD5Q8WTR4 605 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CASP10Q92851 521 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NXNL1Q96CM4 212 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 HHIPL1Q96JK4 782 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 MRGPRX2Q96LB1 330 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 C1orf74Q96LT6 269 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 GPR78Q96P69 363 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 TMEM209Q96SK2 561 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NUF2Q9BZD4 464 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 FAM192AQ9GZU8 254 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 POMKQ9H5K3 350 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ARNT2Q9HBZ2 717 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 NCKIPSDQ9NZQ3 722 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 C6orf203Q9P0P8 240 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 SFMBT1Q9UHJ3 866 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 IPO11Q9UI26 975 aaKnown RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 ZDHHC2Q9UIJ5 367 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 INPP5FQ9Y2H2 1132 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ASB3Q9Y575 518 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 VWA8A3KMH1 1905 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CASP8AP2Q9UKL3 1982 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 A0A1W2PQH9 124 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 MSI1O43347 362 aaKnown RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 TADA2AO75478 443 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 PAPSS2O95340 614 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 MOCS2O96007 188 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 UBTFL6P0CB48 400 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 CYBAP13498 195 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 UQCRBP14927 111 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 EPHA3P29320 983 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 CCR10P46092 362 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 SERPINH1P50454 418 aaKnown RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 RENBPP51606 427 aa8.14□□□□□ -1.11
GPC3-204ENST00000631057 ZNF157P51786 506 aaPredicted RBP8.14□□□□□ -1.11
GPC3-204ENST00000631057 NDST2P52849 883 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms