RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MBTPS2O43462 519 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 KAT7O95251 611 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 NFKB1P19838 968 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PDE1BQ01064 536 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PON2Q15165 354 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PGAP3Q96FM1 320 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 MTMR10Q9NXD2 777 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ARHGEF38Q9NXL2 777 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 C2CD4DB7Z1M9 353 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 OPHN1O60890 802 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 UGT2B4P06133 528 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SERPINB9P50453 376 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 NCALDP61601 193 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 LMAN2Q12907 356 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 BNIP1Q12981 228 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 TDGQ13569 410 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 AHI1Q8N157 1196 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PPP1R2P1Q96PQ5 205 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 TTC1Q99614 292 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 UBOX5O94941 541 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC6A4P31645 630 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PLEKHG6Q3KR16 790 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 TAS2R42Q7RTR8 314 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SKA2Q8WVK7 121 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 CENPIQ92674 756 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 FGF14Q92915 247 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ACDQ96AP0 544 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 VAT1Q99536 393 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 TUBB6Q9BUF5 446 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 COPEO14579 308 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 HLA-EP13747 358 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 IL9P15248 144 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PSMB4P28070 264 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ARMC12Q5T9G4 340 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 PPM1NQ8N819 430 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 DCAKDQ8WVC6 231 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 NAT9Q9BTE0 207 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
SYNGAP1-207ENST00000628646 DNTTP04053 509 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZDHHC11BP0C7U3 371 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 RPA3P35244 121 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 MNAT1P51948 309 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 TMPRSS15P98073 1019 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PITRM1Q5JRX3 1037 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 ELOVL2Q9NXB9 296 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 GGT7Q9UJ14 662 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PCDHB9Q9Y5E1 797 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 A0A0A0MRY4 1105 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 J3KR12 359 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 STX7O15400 261 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PIAS1O75925 651 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 LATS1O95835 1130 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 SSTR1P30872 391 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 KCNJ11Q14654 390 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 ADGRD1Q6QNK2 874 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 RTP4Q96DX8 246 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 SPATA13Q96N96 652 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PRDM6Q9NQX0 595 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM8A1Q9UBU6 413 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 SUN2Q9UH99 717 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 MID2Q9UJV3 735 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 CHADO15335 359 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 CYP17A1P05093 508 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 GSTA2P09210 222 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 TPH1P17752 444 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 PSMD8P48556 350 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 HCAR3P49019 387 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM3CQ92520 227 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 WBP2Q969T9 261 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC39A13Q96H72 371 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 TMEM248Q9NWD8 314 aa12.58□□□□□ -0.4
SYNGAP1-207ENST00000628646 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SPAG7O75391 227 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 PAMP19021 973 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SPATA21Q7Z572 469 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms