RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PKN3Q6P5Z2 889 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ADGRD1Q6QNK2 874 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 NLRP9Q7RTR0 991 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 KIAA0907Q7Z7F0 614 aaPredicted RBP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 SLC26A11Q86WA9 606 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 AHI1Q8N157 1196 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 SH2D3CQ8N5H7 860 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 GABPB2Q8TAK5 448 aaPredicted RBP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 SLC44A1Q8WWI5 657 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ISG20Q96AZ6 181 aaKnown RBP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 LRRC3BQ96PB8 259 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 PAFAH2Q99487 392 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ADGRE3Q9BY15 652 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 CEP44Q9C0F1 390 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 S1PR5Q9H228 398 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 CNOT10Q9H9A5 744 aaKnown RBP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 PLAC1Q9HBJ0 212 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 NOD2Q9HC29 1040 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 PIH1D1Q9NWS0 290 aaKnown RBP7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 NSMCE4AQ9NXX6 385 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 EURLQ9NYK6 297 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 MOCS1Q9NZB8 636 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 CLEC1BQ9P126 229 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 LHX3Q9UBR4 397 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 PRKAG3Q9UGI9 489 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ZNF180Q9UJW8 692 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 FBXO10Q9UK96 956 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 CLEC4EQ9ULY5 219 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 HS3ST2Q9Y278 367 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 TCAF1Q9Y4C2 921 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ACTL7BQ9Y614 415 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ACTL7AQ9Y615 435 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 RPS6KL1Q9Y6S9 549 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 FAM169AQ9Y6X4 670 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 ANAPC1Q9H1A4 1944 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 OBSL1O75147 1896 aa7.62□□□□□ -1.19
PTP4A1-206ENST00000627002 IQANK1A0A1B0GTG1 560 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 TTC24A2A3L6 582 aaPredicted RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 A6NNZ2 444 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SOCS5O75159 536 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 KRT37O76014 449 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PAPSS2O95340 614 aaPredicted RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 IGSF6O95976 241 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 GSRP00390 522 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 ASLP04424 464 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 ATXN1LP0C7T5 689 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 KRT15P19012 456 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 POLR2EP19388 210 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 FCARP24071 287 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CNTFP26441 200 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 GCAP28676 217 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PLA2G5P39877 138 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 RGRP47804 291 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 DGKGP49619 791 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 NUMBP49757 651 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SERPINB9P50453 376 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SNRPD1P62314 119 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PPP2R2AP63151 447 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CBX1P83916 185 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 ECT2LQ008S8 904 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 MGAT5Q09328 741 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 FCHO2Q0JRZ9 810 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SEPT6Q14141 434 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 POU6F1Q14863 301 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 COL19A1Q14993 1142 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 EFTUD2Q15029 972 aaKnown RBP eCLIP7.61□□□□□ -1.193e-6■■■■■ 41.9
PTP4A1-206ENST00000627002 TMED2Q15363 201 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SKIDA1Q1XH10 827 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 TUBB8Q3ZCM7 444 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PREPLQ4J6C6 727 aaPredicted RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SIRPB2Q5JXA9 342 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 EMC10Q5UCC4 262 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 MBLAC2Q68D91 279 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PDPK2PQ6A1A2 396 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 NCEH1Q6PIU2 408 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 KDM7AQ6ZMT4 941 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 MARK2Q7KZI7 788 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 KDELC2Q7Z4H8 507 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SRLQ86TD4 932 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 RASSF3Q86WH2 238 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 MFSD6LQ8IWD5 586 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CTAGE3PQ8IX95 158 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 YAF2Q8IY57 180 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CPA6Q8N4T0 437 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 SLC25A41Q8N5S1 370 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PCDH20Q8N6Y1 951 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 DCAKDQ8WVC6 231 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PEX13Q92968 403 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 ELSPBP1Q96BH3 223 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 ZNF669Q96BR6 464 aaPredicted RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 RSPRY1Q96DX4 576 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 MTBPQ96DY7 904 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CERS2Q96G23 380 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 NECTIN4Q96NY8 510 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 TRIB3Q96RU7 358 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 TDRD1Q9BXT4 1180 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 PPANQ9NQ55 473 aaKnown RBP7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 CHRAC1Q9NRG0 131 aa7.61□□□□□ -1.19
PTP4A1-206ENST00000627002 RYDENQ9NUL5 291 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms