RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GALNT2Q10471 571 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 SGCGQ13326 291 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 STAT4Q14765 748 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 IFI16Q16666 785 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 HLA-BQ31612 363 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 SEL1L3Q68CR1 1132 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 KIAA1161Q6NSJ0 714 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 C11orf63Q6NUN7 778 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 PQLC3Q8N755 202 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCNYQ8ND76 341 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 CALR3Q96L12 384 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZNF641Q96N77 438 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 PSKH2Q96QS6 385 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 ORAI3Q9BRQ5 295 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 SUV39H2Q9H5I1 410 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 HAUS2Q9NVX0 235 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 DKK3Q9UBP4 350 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 ITM2BQ9Y287 266 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 TTLL3Q9Y4R7 772 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 HEY1Q9Y5J3 304 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 SNX11Q9Y5W9 270 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 KNL1Q8NG31 2342 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 RCCD1A6NED2 376 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 AP1G1O43747 822 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZFXP17010 805 aaPredicted RBP14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 HNRNPA2B1P22626 353 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 AKT2P31751 481 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 MAXP61244 160 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 AP1S1P61966 158 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 ITKQ08881 620 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 KIF5AQ12840 1032 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZNF284Q2VY69 593 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 VSIG1Q86XK7 387 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 TMEM139Q8IV31 216 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCDC50Q8IVM0 306 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 TPCN2Q8NHX9 752 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 CXorf40AQ8TE69 158 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 DESI2Q9BSY9 194 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 GGT7Q9UJ14 662 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 REXO2Q9Y3B8 237 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 PCDH15Q96QU1 1955 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
PCDHGC3-208ENST00000622836 SHROOM3Q8TF72 1996 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 TTC24A2A3L6 582 aaPredicted RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 IGLON5A6NGN9 336 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 C3orf70A6NLC5 250 aaPredicted RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZNF487B1APH4 448 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 KCNK3O14649 394 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 WNT9AO14904 365 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 MUSKO15146 869 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 MAGEC1O60732 1142 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 GJB3O75712 270 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 PEX11BO96011 259 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 WNT1P04628 370 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 TIMP2P16035 220 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 SUOXP51687 545 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 BNC1Q01954 994 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 PPM1JQ5JR12 505 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 KAZNQ674X7 775 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 MFSD7Q6UXD7 560 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZSCAN30Q86W11 494 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 PDCD6IPQ8WUM4 868 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 SLC17A9Q9BYT1 436 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 SLC32A1Q9H598 525 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 IL21RQ9HBE5 538 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 NT5MQ9NPB1 228 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 FZD3Q9NPG1 666 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 GDF3Q9NR23 364 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 DNAAF2Q9NVR5 837 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZFR2Q9UPR6 939 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 CA5BQ9Y2D0 317 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 DUSP10Q9Y6W6 482 aa14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 CNOT1A5YKK6 2376 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-208ENST00000622836 ASCC3Q8N3C0 2202 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 A0A1W2PR77 199 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 MACROD2A1Z1Q3 448 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 BTNL10A8MVZ5 291 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 UPK3BL1B0FP48 263 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 UPK3BL2E5RIL1 263 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 TLR4O00206 839 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 MATN3O15232 486 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 ZRANB2O95218 330 aaKnown RBP eCLIP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 PAK4O96013 591 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCNCP24863 283 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCT8P50990 548 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 NOVA1P51513 510 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 POLR2LP62875 67 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 FAM193AP78312 1265 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 AP1B1Q10567 949 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms