RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CATSPER2Q96P56 530 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 BBS4Q96RK4 519 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 RMND5AQ9H871 391 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 ABCB8Q9NUT2 735 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.32□□□□□ -0.92
GGA3-223ENST00000621870 PCYOX1Q9UHG3 505 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SPTBN2O15020 2390 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 C2CD4BA6NLJ0 364 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 EEF1DP29692 281 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 KRT20P35900 424 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 GPR15P49685 360 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 SLC16A1P53985 500 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 SLC20A2Q08357 652 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 IL27RAQ6UWB1 636 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 GRASPQ7Z6J2 395 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 MTDHQ86UE4 582 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 SERINC5Q86VE9 423 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 FAM126BQ8IXS8 530 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ZNF366Q8N895 744 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 PTGR2Q8N8N7 351 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 ZNF398Q8TD17 642 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 PSMG2Q969U7 264 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 POMKQ9H5K3 350 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 PHPT1Q9NRX4 125 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 THEGQ9P2T0 379 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 DNAJB4Q9UDY4 337 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 FCF1Q9Y324 198 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 TCRBV7S2A1N4TA0A589 114 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ENPP3O14638 875 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 TPP1O14773 563 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 NDUFB5O43674 189 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 MT-CYBP00156 380 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 PIGRP01833 764 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 HSPA1AP0DMV8 641 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 HSPA1BP0DMV9 641 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 GJA5P36382 358 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 CENPAP49450 140 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 DAB2P98082 770 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 CCDC153Q494R4 210 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 FNBP1LQ5T0N5 605 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 SCIMPQ6UWF3 145 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 PARGQ86W56 976 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ST13P4Q8IZP2 240 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 TSEN2Q8NCE0 465 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 OR4L1Q8NH43 312 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 AP2M1Q96CW1 435 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 APOPT1Q96IL0 206 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 CCSER2Q9H7U1 834 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 SYBUQ9NX95 663 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 GNPTGQ9UJJ9 305 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 HAO1Q9UJM8 370 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ASB3Q9Y575 518 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 GSAPA4D1B5 854 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 C5orf60A6NFR6 353 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 H0Y858 1186 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 PRMT5O14744 637 aaPredicted RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 NDST3O95803 873 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 LTA4HP09960 611 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 KELP23276 732 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 ASPAP45381 313 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 CAPZA2P47755 286 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 SLC1A6P48664 564 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 RAB30Q15771 203 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 CPSF6Q16630 551 aaKnown RBP eCLIP9.31□□□□□ -0.92
GGA3-223ENST00000621870 LRRC73Q5JTD7 316 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 HLA-DQA1Q5Y7H0 255 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 KLK6Q92876 244 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 BADQ92934 168 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 FAM120BQ96EK7 910 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 KLHL3Q9UH77 587 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 NOCTQ9UK39 431 aaKnown RBP9.31□□□□□ -0.92
GGA3-223ENST00000621870 COG5Q9UP83 839 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 TELO2Q9Y4R8 837 aa9.31□□□□□ -0.92
GGA3-223ENST00000621870 FSBPO95073 299 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 ZNF682O95780 498 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 PRNPP04156 253 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CLCN5P51795 746 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 PRKAG1P54619 331 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 SKP1P63208 163 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 ALDH6A1Q02252 535 aaKnown RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 GAD2Q05329 585 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 SLC39A4Q6P5W5 647 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CMC1Q7Z7K0 106 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TMCO5AQ8N6Q1 288 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 RNF148Q8N7C7 305 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 ZNF461Q8TAF7 563 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 KCTD4Q8WVF5 259 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TBATAQ96M53 351 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 MAGEH1Q9H213 219 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TLR9Q9NR96 1032 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CCDC167Q9P0B6 97 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 BTNL10A8MVZ5 291 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 FTH1P02794 183 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms