RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MAGEC1O60732 1142 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RAMP2O60895 175 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SIN3BO75182 1162 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 NDUFS2O75306 463 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 GJB3O75712 270 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 DNTTP04053 509 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KRT1P04264 644 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SERPINF2P08697 491 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KRT7P08729 469 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF883P0CG24 379 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PYGMP11217 842 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CDK4P11802 303 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KRT10P13645 584 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 GABRG2P18507 467 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 NDUFV2P19404 249 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 C5AR1P21730 350 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 TGM1P22735 817 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ATP5DP30049 168 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CD6P30203 668 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 OR1E1P30953 314 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CTNNA1P35221 906 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SLC1A1P43005 524 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RGRP47804 291 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PAPOLAP51003 745 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SERINC3Q13530 473 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KRT81Q14533 505 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 IHHQ14623 411 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SLMAPQ14BN4 828 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 POLD3Q15054 466 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PAFAH1B3Q15102 231 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CYTH1Q15438 398 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 HADHQ16836 314 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 DUOXA1Q1HG43 343 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 MAP7D1Q3KQU3 841 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 FNDC3BQ53EP0 1204 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 INO80DQ53TQ3 878 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ANKRD20A8PQ5CZ79 823 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 C9orf64Q5T6V5 341 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF776Q68DI1 518 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 HEATR6Q6AI08 1181 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SLC9A4Q6AI14 798 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ANO7Q6IWH7 933 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RETSATQ6NUM9 610 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PRR23CQ6ZRP0 262 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 Q6ZVU0 165 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SYDE1Q6ZW31 735 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CYP2U1Q7Z449 544 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 DAAM2Q86T65 1068 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 IQCHQ86VS3 1027 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 HOOK3Q86VS8 718 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 TMPRSS6Q8IU80 811 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 LRRC49Q8IUZ0 686 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RHOT1Q8IXI2 618 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KATNAL2Q8IYT4 538 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 STK40Q8N2I9 435 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PGBD3Q8N328 593 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SH2D3CQ8N5H7 860 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 LZTR1Q8N653 840 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 UBL4BQ8N7F7 174 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PLD5Q8N7P1 536 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KCTD6Q8NC69 237 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CHST14Q8NCH0 376 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 BCAS4Q8TDM0 211 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 HCAR2Q8TDS4 363 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 MRGPRX1Q96LB2 322 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ATP6V1G3Q96LB4 118 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RNF157Q96PX1 679 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PHOX2BQ99453 314 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF670Q9BS34 389 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 TMEM109Q9BVC6 243 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CALN1Q9BXU9 219 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ROPN1BQ9BZX4 212 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 MUC3BQ9H195 1237 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RSPH9Q9H1X1 276 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 MAGEH1Q9H213 219 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ACTR5Q9H9F9 607 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ROPN1Q9HAT0 212 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PDFQ9HBH1 243 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SLC24A3Q9HC58 644 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 EPB41L5Q9HCM4 733 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ATP13A1Q9HD20 1204 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 FAM86C1Q9NVL1 165 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 HAUS2Q9NVX0 235 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SAE1Q9UBE0 346 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SERGEFQ9UGK8 458 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 RSPH14Q9UHP6 348 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 DMGDHQ9UI17 866 aaKnown RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PILRBQ9UKJ0 227 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SARDHQ9UL12 918 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 INVSQ9Y283 1065 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PCDHA3Q9Y5H8 950 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 CFAP47Q6ZTR5 3102 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 hCG_1818297A0A087WSY0 165 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 A0A1W2PQ67 120 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TTC24A2A3L6 582 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 LRRC72A6NJI9 287 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF487B1APH4 448 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms