RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PDFQ9HBH1 243 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 ZNF334Q9HCZ1 680 aaPredicted RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 SPG21Q9NZD8 308 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 SORCS3Q9UPU3 1222 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 PRAMEF11O60813 436 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 LYPLA1O75608 230 aaPredicted RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 CTBP1Q13363 440 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 TUBB3Q13509 450 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 SEPT6Q14141 434 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 CCDC153Q494R4 210 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 DNAJB7Q7Z6W7 309 aaPredicted RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 DDX53Q86TM3 631 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 C10orf107Q8IVU9 208 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 SPNS2Q8IVW8 549 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 ARHGAP24Q8N264 748 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 PPHLN1Q8NEY8 458 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 VPS39Q96JC1 886 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 CDK5RAP1Q96SZ6 601 aaKnown RBP19.32■□□□□ 0.68
MMP28-204ENST00000615136 EBF4Q9BQW3 602 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 TREX1Q9NSU2 369 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 SMPD4Q9NXE4 827 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 TAGLN3Q9UI15 199 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 DNAJC16Q9Y2G8 782 aa19.32■□□□□ 0.68
MMP28-204ENST00000615136 PRRG1O14668 218 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 TSPAN3O60637 253 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 URODP06132 367 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 ENO1P06733 434 aaKnown RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 CSE1LP55060 971 aaKnown RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 YBEYP58557 167 aaPredicted RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 MPP1Q00013 466 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 GRM3Q14832 879 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 PDPK2PQ6A1A2 396 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 KLHDC10Q6PID8 442 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 POTEHQ6S545 545 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 TMPRSS6Q8IU80 811 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 OR6Y1Q8NGX8 325 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 TADA1Q96BN2 335 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 NSMCE3Q96MG7 304 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 SORT1Q99523 831 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 KLF16Q9BXK1 252 aaPredicted RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 DONSONQ9NYP3 566 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
MMP28-204ENST00000615136 UXTQ9UBK9 157 aaPredicted RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 AGO1Q9UL18 857 aaKnown RBP19.31■□□□□ 0.68
MMP28-204ENST00000615136 TEX28O15482 410 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 MAGEC1O60732 1142 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 AHSGP02765 367 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 ALOX15P16050 662 aaPredicted RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 LAG3P18627 525 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 SLC11A2P49281 568 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 RAP1GDS1P52306 607 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 ZXDBP98169 803 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 TNK2Q07912 1038 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 TAF12Q16514 161 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 KHDC1Q4VXA5 237 aaKnown RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 ATG14Q6ZNE5 492 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 CLEC14AQ86T13 490 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 MFSD6LQ8IWD5 586 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.3■□□□□ 0.68
MMP28-204ENST00000615136 CMTR2Q8IYT2 770 aaKnown RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 MAB21L3Q8N8X9 362 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 KCNV2Q8TDN2 545 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 TRMT2BQ96GJ1 504 aaKnown RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 SEMA3CQ99985 751 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 FAM96AQ9H5X1 160 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 ARNT2Q9HBZ2 717 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 INSL5Q9Y5Q6 135 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 RAG1P15918 1043 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 AOC1P19801 751 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 GNA12Q03113 381 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 RABGAP1LQ5R372 815 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 ZC3HC1Q86WB0 502 aaKnown RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 CCDC117Q8IWD4 279 aaPredicted RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 ZFRQ96KR1 1074 aaKnown RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 RILPQ96NA2 401 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 YME1L1Q96TA2 773 aa19.3■□□□□ 0.68
MMP28-204ENST00000615136 MYCBPQ99417 103 aaPredicted RBP19.3■□□□□ 0.68
MMP28-204ENST00000615136 PLXNA4Q9HCM2 1894 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 B2RBV5 119 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 AURKAO14965 403 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 MPOP05164 745 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 ATXN1LP0C7T5 689 aaKnown RBP19.29■□□□□ 0.68
MMP28-204ENST00000615136 ALDH18A1P54886 795 aaKnown RBP19.29■□□□□ 0.68
MMP28-204ENST00000615136 ACSBG2Q5FVE4 666 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 SIRPB2Q5JXA9 342 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 ACBD5Q5T8D3 534 aaPredicted RBP19.29■□□□□ 0.68
MMP28-204ENST00000615136 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 PLD4Q96BZ4 506 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 PPP1R2P1Q96PQ5 205 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 DNAJC28Q9NX36 388 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 SLC39A10Q9ULF5 831 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 PLA2G4CQ9UP65 541 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 A0A096LPK6 155 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 PRR5-ARHGAP8B1AHC4 643 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 SPECC1L-ADORA2AF8WAN1 911 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 CCL22O00626 93 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 NRG2O14511 850 aaPredicted RBP19.29■□□□□ 0.68
MMP28-204ENST00000615136 TIMM44O43615 452 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 C2P06681 752 aa19.29■□□□□ 0.68
MMP28-204ENST00000615136 LINC00271P0C7V0 271 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms