RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 VPS36Q86VN1 386 aa15□□□□□ -0.01
PRKN-211ENST00000615065 ARFGAP1Q8N6T3 406 aa15□□□□□ -0.01
PRKN-211ENST00000615065 ASB12Q8WXK4 309 aa15□□□□□ -0.01
PRKN-211ENST00000615065 CENPTQ96BT3 561 aa15□□□□□ -0.01
PRKN-211ENST00000615065 CELF6Q96J87 481 aaKnown RBP15□□□□□ -0.01
PRKN-211ENST00000615065 PEBP4Q96S96 227 aa15□□□□□ -0.01
PRKN-211ENST00000615065 TRIM7Q9C029 511 aa15□□□□□ -0.01
PRKN-211ENST00000615065 HAUS4Q9H6D7 363 aa15□□□□□ -0.01
PRKN-211ENST00000615065 LRRC19Q9H756 370 aa15□□□□□ -0.01
PRKN-211ENST00000615065 PDFQ9HBH1 243 aa15□□□□□ -0.01
PRKN-211ENST00000615065 SCUBE2Q9NQ36 999 aa15□□□□□ -0.01
PRKN-211ENST00000615065 DKK3Q9UBP4 350 aa15□□□□□ -0.01
PRKN-211ENST00000615065 UBA2Q9UBT2 640 aaPredicted RBP15□□□□□ -0.01
PRKN-211ENST00000615065 IPO11Q9UI26 975 aaKnown RBP15□□□□□ -0.01
PRKN-211ENST00000615065 CLCA2Q9UQC9 943 aa15□□□□□ -0.01
PRKN-211ENST00000615065 U3KQA8 63 aa15□□□□□ -0.01
PRKN-211ENST00000615065 NEMP2A6NFY4 417 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 J3KR12 359 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 K7ESM1 405 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 EEF2KO00418 725 aaKnown RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 HTR7P34969 479 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 SEMG2Q02383 582 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 PPP1R2P3Q6NXS1 205 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 PDZD3Q86UT5 571 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 DCBLD1Q8N8Z6 715 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 CXorf40AQ8TE69 158 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 NAP1L5Q96NT1 182 aaPredicted RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 DCBLD2Q96PD2 775 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 KCTD15Q96SI1 283 aaPredicted RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 NCAPGQ9BPX3 1015 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 WRAP53Q9BUR4 548 aaKnown RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 SNRNP25Q9BV90 132 aaKnown RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 CPEB1Q9BZB8 566 aaKnown RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 NRSN2Q9GZP1 204 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 DHX35Q9H5Z1 703 aaKnown RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 PCSK1NQ9UHG2 260 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 AK5Q9Y6K8 562 aa14.99□□□□□ -0.01
PRKN-211ENST00000615065 COL27A1Q8IZC6 1860 aaPredicted RBP14.99□□□□□ -0.01
PRKN-211ENST00000615065 LRP4O75096 1905 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 A0A087WV48 116 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 TMEM191CA6NGB0 347 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 SMTNL1A8MU46 457 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 H3BM21 787 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 TLX3O43711 291 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 PRAMEF11O60813 436 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 TM7SF2O76062 418 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 MT-CO3P00414 261 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 FTLP02792 175 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 JUNDP17535 347 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 E2F1Q01094 437 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 RTP5Q14D33 572 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 KLHL40Q2TBA0 621 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 FILIP1LQ4L180 1135 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 ERMARDQ5T6L9 678 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 CYP4V2Q6ZWL3 525 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 RBFAQ8N0V3 343 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 CACTIN-AS1Q8N1I8 211 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 FAM181AQ8N9Y4 354 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 TP53I13Q8NBR0 393 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 DUSP23Q9BVJ7 150 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 SLC39A8Q9C0K1 460 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 TCEAL2Q9H3H9 227 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 MBNL1Q9NR56 388 aaKnown RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 AIPL1Q9NZN9 384 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 PNMA8BQ9ULN7 279 aaPredicted RBP14.98□□□□□ -0.01
PRKN-211ENST00000615065 COQ6Q9Y2Z9 468 aa14.98□□□□□ -0.01
PRKN-211ENST00000615065 ASXL3Q9C0F0 2248 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 A0A1B0GTH6 734 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 A0A1W2PQC6 194 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 TSPAN11A1L157 253 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 DDX3XO00571 662 aaKnown RBP eCLIP14.97□□□□□ -0.01
PRKN-211ENST00000615065 AQP9O43315 295 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 OPA1O60313 960 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 XPAP23025 273 aaPredicted RBP14.97□□□□□ -0.01
PRKN-211ENST00000615065 MIPP30301 263 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 PRKCIP41743 596 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 RGRP47804 291 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 ZNF165P49910 485 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 PAPOLAP51003 745 aaKnown RBP14.97□□□□□ -0.01
PRKN-211ENST00000615065 NDST2P52849 883 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 THOP1P52888 689 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 IRF4Q15306 451 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 DEFB133Q30KQ1 61 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 RFX8Q6ZV50 586 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 ARHGAP12Q8IWW6 846 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 NPWQ8N729 165 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 LMX1AQ8TE12 382 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 C1QTNF7Q9BXJ2 289 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 SUV39H2Q9H5I1 410 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 DONSONQ9NYP3 566 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
PRKN-211ENST00000615065 PCDHB1Q9Y5F3 818 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 CSNK1G3Q9Y6M4 447 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 LOC400499M0QZD8 3231 aa14.97□□□□□ -0.01
PRKN-211ENST00000615065 ARHGAP42A6NI28 874 aa14.96□□□□□ -0.01
PRKN-211ENST00000615065 EIF3CLB5ME19 914 aaKnown RBP14.96□□□□□ -0.01
PRKN-211ENST00000615065 DAPK3O43293 454 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms