RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MUC13Q9H3R2 512 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 EPB41L1Q9H4G0 881 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 ATP13A3Q9H7F0 1226 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 DERAQ9Y315 318 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 GMPPBQ9Y5P6 360 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM237BA0A1B0GVD1 139 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 TGDSO95455 350 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 HIST1H2ABP04908 130 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CCDC166P0CW27 439 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CELF3Q5SZQ8 465 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 LRRC55Q6ZSA7 311 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 HIST3H2AQ7L7L0 130 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 PLPPR4Q7Z2D5 763 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 HIST1H2ACQ93077 130 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 UMPSP11172 480 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 DRD4P21917 467 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 PPP3CAQ08209 521 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 BIKQ13323 160 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 HYIQ5T013 277 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 HECTD3Q5T447 861 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 POTEHQ6S545 545 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 DNAJC14Q6Y2X3 702 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 RBM44Q6ZP01 1051 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 GPRIN3Q6ZVF9 776 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM183BPQ6ZVS7 135 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 MAF1Q9H063 256 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 COMMD9Q9P000 198 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 UBIAD1Q9Y5Z9 338 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 AK5Q9Y6K8 562 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CASZ1Q86V15 1759 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 LOC100506127A0A0U1RQW1 187 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 PDE2AO00408 941 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 ULK1O75385 1050 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 MAFO75444 373 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 ADORA2AP29274 412 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 GRIA4P48058 902 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CLK3P49761 638 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 DGCR6Q14129 220 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 FSCN1Q16658 493 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CCDC80Q76M96 950 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 BPIFB6Q8NFQ5 453 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 SUSD6Q92537 303 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 MEGF6O75095 1541 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 hCG_1818297A0A087WSY0 165 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 BTN3A3O00478 584 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 BDNFP23560 247 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CCNHP51946 323 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 SLC25A3Q00325 362 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ZDHHC20Q5W0Z9 365 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 FBXL19Q6PCT2 694 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 UNC5AQ6ZN44 842 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 POC5Q8NA72 575 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 SNRNP25Q9BV90 132 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 MTFR1LQ9H019 292 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CCNB1P14635 433 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CHKAP35790 457 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 GRIA3P42263 894 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CRATP43155 626 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 MARSP56192 900 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 PRKG2Q13237 762 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 PEX6Q13608 980 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 DPYSQ14117 519 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 DENND5AQ6IQ26 1287 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 TTC7BQ86TV6 843 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 C12orf56Q8IXR9 622 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 OFCC1Q8IZS5 231 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 FBXO30Q8TB52 745 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ERGIC3Q9Y282 383 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ASTN1O14525 1302 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 RCVRNP35243 200 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 LSM12Q3MHD2 195 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 GALNT18Q6P9A2 607 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 COMMD2Q86X83 199 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CXorf40AQ8TE69 158 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM124BQ9H5Z6 455 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CLK4Q9HAZ1 481 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 AKAP7Q9P0M2 348 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CPA4Q9UI42 421 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 IKZF3Q9UKT9 509 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 SLC9A8Q9Y2E8 581 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ALOX15BO15296 676 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 NAGLUP54802 743 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 VSIG10LQ86VR7 867 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 DNAAF5Q86Y56 855 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CAMKK1Q8N5S9 505 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ITCHQ96J02 903 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 FGF1P05230 155 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ENO2P09104 434 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 FGRP09769 529 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 IL12AP29459 219 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 CLK2P49760 499 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 MIIPQ5JXC2 388 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 BRMS1LQ5PSV4 323 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 NUDT5Q9UKK9 219 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 SH3GLB1Q9Y371 365 aa17.53■□□□□ 0.4
HMGXB3-206ENST00000613459 ADGRB1O14514 1584 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms