RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FBXO27Q8NI29 283 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SCAMP5Q8TAC9 235 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ACTRT2Q8TDY3 377 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ASIC4Q96FT7 647 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 MPP4Q96JB8 637 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 VPS50Q96JG6 964 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CCDC90BQ9GZT6 254 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 C1orf21Q9H246 121 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 DDX18Q9NVP1 670 aaKnown RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.76□□□□□ -1.01
LIG4-204ENST00000611712 UXTQ9UBK9 157 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 STK39Q9UEW8 545 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ARFGEF1Q9Y6D6 1849 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 NEMP2A6NFY4 417 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CBX4O00257 560 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 INPP4BO15327 924 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 KCNE1P15382 129 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ITGAXP20702 1163 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 PRDX6P30041 224 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 OXCT1P55809 520 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 XIAPP98170 497 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CDK18Q07002 472 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZBTB17Q13105 803 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZNF177Q13360 481 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 SQLEQ14534 574 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 AMIGO2Q86SJ2 522 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CUZD1Q86UP6 607 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FAM156AQ8NDB6 213 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 KCTD13Q8WZ19 329 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 DCUN1D1Q96GG9 259 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FCRL3Q96P31 734 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 WDR83Q9BRX9 315 aaKnown RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 CCDC106Q9BWC9 280 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZYG11BQ9C0D3 744 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 POLR1EQ9GZS1 481 aaKnown RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 ADNPQ9H2P0 1102 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TLR8Q9NR97 1041 aaKnown RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 OXSMQ9NWU1 459 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TAS2R13Q9NYV9 303 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TCAF1Q9Y4C2 921 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 WNK3Q9BYP7 1800 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 UBR3Q6ZT12 1888 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 C15orf38-AP3S2A0A0A6YYH1 394 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ARL5CA6NH57 179 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZNF839A8K0R7 811 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SYCE1LA8MT33 242 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 KCNU1A8MYU2 1149 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FMO4P31512 558 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 GRIA3P42263 894 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TIGD5Q53EQ6 642 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 PPM1LQ5SGD2 360 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FAM171A1Q5VUB5 890 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ARPINQ7Z6K5 226 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 LRRC49Q8IUZ0 686 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 MIER2Q8N344 545 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.76□□□□□ -1.01
LIG4-204ENST00000611712 GPR152Q8TDT2 470 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TRPC4APQ8TEL6 797 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 HEXDCQ8WVB3 486 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 GLT1D1Q96MS3 346 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CCDC28BQ9BUN5 200 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FTHL17Q9BXU8 183 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ZCWPW1Q9H0M4 648 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SPAG4Q9NPE6 437 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SEMA4BQ9NPR2 832 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 PKP3Q9Y446 797 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TRAF6Q9Y4K3 522 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CDK5RAP2Q96SN8 1893 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SOCS7O14512 581 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 MATN3O15232 486 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 IPO13O94829 963 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 ZNF23P17027 643 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SLC5A3P53794 718 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ADRM1Q16186 407 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 LIN52Q52LA3 116 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ZNF280DQ6N043 979 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 LGI2Q8N0V4 545 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 PGAM4Q8N0Y7 254 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 KBTBD7Q8WVZ9 684 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SMOQ99835 787 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 TLE6Q9H808 572 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 DNAJB4Q9UDY4 337 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 A0A1W2PQH9 124 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 FASP25445 335 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 RALGDSQ12967 914 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 TUSC3Q13454 348 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 EP400NLQ6ZTU2 488 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 CYS1Q717R9 158 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ANKRD23Q86SG2 305 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ZC3HC1Q86WB0 502 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 LPCAT1Q8NF37 534 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 NPLOC4Q8TAT6 608 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 BRI3BPQ8WY22 251 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 MOCOSQ96EN8 888 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms