RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PRPF19Q9UMS4 504 aaKnown RBP10.54□□□□□ -0.72
PABPC1-224ENST00000610907 LOC285095A0A1B0GVY8 99 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MROH6A6NGR9 719 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 GRID2O43424 1007 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 B4GALT3O60512 393 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 HOXD10P28358 340 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 HOXD11P31277 338 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 SATB1Q01826 763 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 GALNT1Q10472 559 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 ELAVL2Q12926 359 aaKnown RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MSLNQ13421 630 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 SEPT6Q14141 434 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 ACAP2Q15057 778 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 KLC3Q6P597 504 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 C16orf89Q6UX73 402 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 PHTF2Q8N3S3 785 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 FBXW8Q8N3Y1 598 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 GPATCH11Q8N954 259 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MAPK15Q8TD08 544 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MIEF2Q96C03 454 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 HMCESQ96FZ2 354 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF599Q96NL3 588 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 CDK5RAP1Q96SZ6 601 aaKnown RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 SERPINI1Q99574 410 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 OMDQ99983 421 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MFSD1Q9H3U5 465 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 EML4Q9HC35 981 aaKnown RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 GPBP1L1Q9HC44 474 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 NT5MQ9NPB1 228 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 SLC2A6Q9UGQ3 507 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 BCAP29Q9UHQ4 241 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 CDH22Q9UJ99 828 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 VPS28Q9UK41 221 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 NUDT5Q9UKK9 219 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 RIMKLBQ9ULI2 386 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 CORO1CQ9ULV4 474 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 CDYLQ9Y232 598 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 SSX2IPQ9Y2D8 614 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
PABPC1-224ENST00000610907 MYO16Q9Y6X6 1858 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 DOCK4Q8N1I0 1966 aa10.53□□□□□ -0.72
PABPC1-224ENST00000610907 CCDC78A2IDD5 438 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 E9PBE3 544 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 H7C4K7 107 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 J3KR12 359 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ZBTB14O43829 449 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 KLHL41O60662 606 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 RAMP2O60895 175 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ALDH2P05091 517 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 CHRNGP07510 517 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MMP2P08253 660 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LTA4HP09960 611 aaKnown RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ITGAXP20702 1163 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 FGFR3P22607 806 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MPSTP25325 297 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 PPARGP37231 505 aaPredicted RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 AVPR1AP37288 418 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 CD86P42081 329 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MTTPP55157 894 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 SESN3P58005 492 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 XIAPP98170 497 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 PFKPQ01813 784 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ACVR1Q04771 509 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 KLC1Q07866 573 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ITKQ08881 620 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 SLC10A7Q0GE19 358 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 EFEMP1Q12805 493 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 GPR17Q13304 367 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 SERINC3Q13530 473 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MBTPS1Q14703 1052 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 POLD3Q15054 466 aaPredicted RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 C5orf22Q49AR2 442 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 FBXL22Q6P050 247 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 FRMD7Q6ZUT3 714 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 SLC22A9Q8IVM8 553 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LSMEM2Q8N112 164 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 POU5F2Q8N7G0 328 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 DTX3LQ8TDB6 740 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 HEXDCQ8WVB3 486 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 FAM136AQ96C01 138 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MAELQ96JY0 434 aaKnown RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 CLPTM1LQ96KA5 538 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LENG8Q96PV6 779 aaPredicted RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 OR52B2Q96RD2 323 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.72
PABPC1-224ENST00000610907 TRMOQ9BU70 441 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 VCX3BQ9H321 246 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF385DQ9H6B1 395 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 S100A14Q9HCY8 104 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 MARCH2Q9P0N8 246 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 ZDHHC2Q9UIJ5 367 aa10.52□□□□□ -0.72
PABPC1-224ENST00000610907 LOC100653049A0A140TA62 436 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms