RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NFKBIZQ9BYH8 718 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 C12orf65Q9H3J6 166 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 OR6C75A6NL08 312 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PRR5-ARHGAP8B1AHC4 643 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 UNGP13051 313 aaPredicted RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ARHGAP8P85298 464 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 TERB1Q8NA31 727 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 OR4L1Q8NH43 312 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ELMO1Q92556 727 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 REPS1Q96D71 796 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 QKIQ96PU8 341 aaKnown RBP eCLIP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 CD3EAPO15446 510 aaKnown RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 COX7A2P14406 83 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PTPN9P43378 593 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 CDH13P55290 713 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF280AP59817 542 aaPredicted RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 SLC10A6Q3KNW5 377 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PLEKHM3Q6ZWE6 761 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 DSG4Q86SJ6 1040 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 ATAD1Q8NBU5 361 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 HJURPQ8NCD3 748 aaPredicted RBP14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 FBXO30Q8TB52 745 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 DNAJB14Q8TBM8 379 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 PADI3Q9ULW8 664 aa14.36□□□□□ -0.11
PCDHB16-201ENST00000609684 VIRMAQ69YN4 1812 aaKnown RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CTPS1P17812 591 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 TAF10Q12962 218 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CPNE8Q86YQ8 564 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CFAP52Q8N1V2 620 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CDH19Q9H159 772 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 SPAG4Q9NPE6 437 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ARHGEF4Q9NR80 690 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 STXBP5LQ9Y2K9 1186 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 KCPQ6ZWJ8 1503 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 SPEF2Q9C093 1822 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 C2CD4BA6NLJ0 364 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 FAM20BO75063 409 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 KCNH1O95259 989 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 VNN1O95497 513 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ACADMP11310 421 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 SMPD1P17405 629 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 OR1D2P34982 312 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CENPAP49450 140 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 DUSP4Q13115 394 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 TTC7BQ86TV6 843 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ULK2Q8IYT8 1036 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 PYROXD2Q8N2H3 581 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 PIK3R5Q8WYR1 880 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 SDCBP2Q9H190 292 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 RIBC2Q9H4K1 309 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ADPRHL2Q9NX46 363 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 GRHL1Q9NZI5 618 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 PCDHB9Q9Y5E1 797 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 COL1A1P02452 1464 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 FAM220BPB1ANY3 271 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 PIK3R1P27986 724 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CRHR1P34998 444 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT78Q8N1N4 520 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF557Q8N988 423 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 LENG1Q96BZ8 264 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ZFRQ96KR1 1074 aaKnown RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 TSEN34Q9BSV6 310 aaKnown RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 TMEM109Q9BVC6 243 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ZFP14Q9HCL3 533 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ARL8BQ9NVJ2 186 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 DHDDSQ86SQ9 333 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF276Q8N554 614 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 DQX1Q8TE96 717 aaKnown RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 MAML3Q96JK9 1138 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 SNX27Q96L92 541 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 KRCC1Q9NPI7 259 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ASAH2Q9NR71 780 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 CHRAC1Q9NRG0 131 aa14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
PCDHB16-201ENST00000609684 ULK1O75385 1050 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 EPN2O95208 641 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CLCNKBP51801 687 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 POM121L1PQ3SYA9 428 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ADGRD1Q6QNK2 874 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 CLVS1Q8IUQ0 354 aaPredicted RBP14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 VPS45Q9NRW7 570 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 DUSP12Q9UNI6 340 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 RPTORQ8N122 1335 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 AZIN1O14977 448 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 ANPEPP15144 967 aa14.34□□□□□ -0.11
PCDHB16-201ENST00000609684 HPCAL1P37235 193 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms