RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 DENND2CQ68D51 928 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 ZNF776Q68DI1 518 aaPredicted RBP10.22□□□□□ -0.77
UPF1-213ENST00000601981 ZC3H14Q6PJT7 736 aaKnown RBP10.22□□□□□ -0.77
UPF1-213ENST00000601981 CROCCP2Q86T23 111 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 PPIL6Q8IXY8 311 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 CCNYQ8ND76 341 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 TFB1MQ8WVM0 346 aaKnown RBP10.22□□□□□ -0.77
UPF1-213ENST00000601981 HMGB4Q8WW32 186 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 PRCCQ92733 491 aaPredicted RBP10.22□□□□□ -0.77
UPF1-213ENST00000601981 HDAC11Q96DB2 347 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 CINPQ9BW66 212 aaPredicted RBP10.22□□□□□ -0.77
UPF1-213ENST00000601981 KLC2Q9H0B6 622 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 EPB41L4BQ9H329 900 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 SLCO3A1Q9UIG8 710 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 HCN2Q9UL51 889 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 SCML1Q9UN30 329 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 FANCMQ8IYD8 2048 aa10.22□□□□□ -0.77
UPF1-213ENST00000601981 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 EML5Q05BV3 1969 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 A0A1W2PQF6 199 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 C5orf60A6NFR6 353 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 GOLGA6L10A6NI86 522 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 EIF3HO15372 352 aaKnown RBP eCLIP10.21□□□□□ -0.77
UPF1-213ENST00000601981 MTSS1O43312 755 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 RIPK2O43353 540 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 SIN3BO75182 1162 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 ZNF217O75362 1048 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 GCATO75600 419 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 TMCC1O94876 653 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 ADH1BP00325 375 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 GSRP00390 522 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 DNTTP04053 509 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 PRNPP04156 253 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CHRM1P11229 460 aaPredicted RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 CCNCP24863 283 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 RBL1P28749 1068 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 MAGEA6P43360 314 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 MAPK8P45983 427 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CBX1P83916 185 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 ZBTB16Q05516 673 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CCDC15Q0P6D6 951 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 GRM3Q14832 879 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 PRKD1Q15139 912 aaPredicted RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 MARC1Q5VT66 337 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 HEATR6Q6AI08 1181 aaKnown RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 ANO7Q6IWH7 933 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 KIAA1324Q6UXG2 1013 aaKnown RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 Q6ZVU0 165 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CCDC25Q86WR0 208 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 RYBPQ8N488 228 aaPredicted RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 ZNF366Q8N895 744 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 NAT8LQ8N9F0 302 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 OR2AP1Q8NGE2 309 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 CPT1BQ92523 772 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 FATE1Q969F0 183 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 SIPA1Q96FS4 1042 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 MYO19Q96H55 970 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 PPP1R16AQ96I34 528 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 SPACA7Q96KW9 195 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 TMEM109Q9BVC6 243 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 FRMD8Q9BZ67 464 aaPredicted RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 CDC42EP4Q9H3Q1 356 aaKnown RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 C10orf88Q9H8K7 445 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 PRSS16Q9NQE7 514 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 EBF1Q9UH73 591 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
UPF1-213ENST00000601981 MFHAS1Q9Y4C4 1052 aa10.21□□□□□ -0.77
UPF1-213ENST00000601981 J3KR12 359 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 K7ESF4 209 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 AXIN1O15169 862 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 MATN3O15232 486 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 MAFKO60675 156 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 STK10O94804 968 aaKnown RBP10.2□□□□□ -0.78
UPF1-213ENST00000601981 MT-CO1P00395 513 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 ABHD2P08910 425 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 MYZAPP0CAP1 466 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 MMP13P45452 471 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 ARL4CP56559 192 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 NHLH1Q02575 133 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
UPF1-213ENST00000601981 ZNF844Q08AG5 666 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 AP1B1Q10567 949 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 CBLBQ13191 982 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
UPF1-213ENST00000601981 KCNJ11Q14654 390 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 USP39Q53GS9 565 aaKnown RBP10.2□□□□□ -0.78
UPF1-213ENST00000601981 CARD16Q5EG05 197 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 CEP85LQ5SZL2 805 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 C9orf64Q5T6V5 341 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 PPP1R21Q6ZMI0 780 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 LEKR1Q6ZMV7 388 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 CENPUQ71F23 418 aa10.2□□□□□ -0.78
UPF1-213ENST00000601981 C11orf74Q86VG3 221 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms